Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03095 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCGAAGTCCTTCTCCCTCAACCGCCAGAACCCCTCCCACCGCCACAAGCACCCCATACGCGCCGCCCCGTACCACCGTCCAATGCCCACGCGCTACCAAGAAGTCGACGACGATGACGACGACAACGAACCCGATGATTTCGACGACGACGAAGGGGAAAACGGTTACGACGAGGAAAACGACGTCGCGTACCCTCGGATCCCGAAGAAGCGCAAGGTAGTCGCCGCCGCAGCAGCAGCAGGCTCCTACGAGTTCGCGCCACGTGTCAAATTCTCGTACGGCTCCCGCGGTTCGGGCGAGGAGTGGAGCGAGCACGAGACTTTCGTGTTGTTAGAGGTTTGGGGCGACAAGTTCCTCCAGCTCGGGAGGAACAGCTTGAGATCCGAGGAATGGCACGAGGTTGCAGAAAAGGTCTCTGAAGAGTTGAAAACAGAGAGAACGGTGACACAGTGTAGGAGCGTGTTGGACAAGCTGAAGAGAAGGTACAAGAAGGAGAAAGCTAGAATGGACGAAATGGGCCTGGGCTCTTGTAAATGGGCCTACTTTAAGAAGATGGACATGTTGATGGCTTCCTCCGCAAGGCAAGAGTATGGGCTTCCTTGTGGGGTGGATTCTGGGGAGTACGTGTTTATGAACACTAGGGTTTACTTGAACCGCTCCAATGGGTTTGATGAGATGAGGGACAGTCCAGGGGAGTCTGAGAGTGATGATGATGATGAGGAGGATGAGGATATTGGTGGTGGTGGTGGGGATCATGATGAGGAGGATGAGACGTCGTTTCGCGTGTTGGCAGATTCGATTCAGAAGTTTGGGAAGATATATGAGAAGATTGAGAATAGTAAGAGGCAGCAGATGATGGAGCTGGAGAAGATGAGGCTGGATTTTAACAGGGAGCTGGAACTGCAGAAGAAGCAGATTCTCGAGAGGGCGCAGGCCGAGATTGCCAAAATTCAGGAAGTGGATGAGGAGGACGATACCGACACTTCCGGTGGGGAGAATCTCAGTGAATGA 1044 0.5374 MDDMEDDARYPPKSFSLNRQNPSHRHKHPIRAAPYHRPMPTRYQEVDDDDDDNEPDDFDDDEGENGYDEENDVAYPRIPKKRKVVAAAAAAGSYEFAPRVKFSYGSRGSGEEWSEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKTERTVTQCRSVLDKLKRRYKKEKARMDEMGLGSCKWAYFKKMDMLMASSARQEYGLPCGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESESDDDDEEDEDIGGGGGDHDEEDETSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEVDEEDDTDTSGGENLSE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03095 347 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 105 330 IPR044823 -
Pumo6g03095 347 Pfam Myb/SANT-like DNA-binding domain 112 198 IPR044822 -
Pumo6g03095 347 Coils Coil 285 334 - -
Pumo6g03095 347 Gene3D - 113 175 - -
Pumo6g03095 347 MobiDBLite consensus disorder prediction 325 347 - -
Pumo6g03095 347 MobiDBLite consensus disorder prediction 232 271 - -
Pumo6g03095 347 MobiDBLite consensus disorder prediction 45 69 - -
Pumo6g03095 347 MobiDBLite consensus disorder prediction 1 71 - -
Pumo6g03095 347 MobiDBLite consensus disorder prediction 241 262 - -
Pumo6g03095 347 Coils Coil 159 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03095 Pumo-Chr6 73433564 73437467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03095 113 334 Trihelix Transcription Factor Family AT1G54060 31.111 4.37e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo6g03095 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03095 - - gmx:100778031 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03095 6 73433564 73437467 Pumo6g03095 6 73433564 73437467 ECH