Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03067 ATGTTACTTGAAACATTAGCTATCCCTACAATAGTACTCCTTTTGATATTCATATTGGTTGTGGTTCATCCAAAGCAACCTCATGGGAAAACTGCACCAGGTCCCAAGGCGTTGCCAATTATTGGTAACCTTCACATGCTAGGGAAACTCCCACACCGCACCCTTCAAATCCTTGCAAGAAAATACGGACCCATAATGTCCCTGAAGCTAGGGCAGGTCCAAGCCATAGTGGTTTCTTCCCCTGAAACCGCAGAACTATTCCTCAAGACCCACGACACCGTTTTTGCCAGCAGGCCCAGAATTCAAGCATCTGAGTCTCTTTGTCATGGCAGCAAGGGCTTGGCGTTTTCCGAGTACAGCGCCTACTGGCGCAACGTGAGGAAAGTGTGCACCCTGCAACTTCTGAGTGCTTCAAAAGTTGAGATGTTTTCTCCTCTGAGGAAAGAGGAGTTGGGAGTGTTGGTGAAGTCACTGAAAAATTCAGCGGCATCACGTGAGGTTGTGGACCTCAGTGAGGAGCTGGGGGAGCTCATGGAGAACATCGTGTATAAAATGATACTGGGGCGCTCTAATGATGATAGATTCGACCTGAAAGGGCTTATTCATGAGGTCATGAACTTGGTGGGAGCTTTCAATCTTGCAGATTACATGCCTTGGCTCGGCACGTTTGATCCTCAGGGAATAACAAGACGATTGAAGAAAGCAAGTAAAGCATTTGACCAAGTCTTGGAGCAGATTATCCATGACCACGAGCAAAATCCATATGATAAAGAGCCAAAAGCCCCACGCAAGAAGGATTTTGTGGACATACTTGTATCACTTATGCACCAACCCATCGATCTTCAAGACCATCAAAATGTCATTGATAGAACTAACATCAAGGCTATTTTATTAGACATGATCGCCGCAACATTTGACACGTCATCCACAACAGTTGAGTGGGCCATGTCAGAACTCTTGAGGCACCCAAGTGTGATGAAAAGACTTCAAGATGAGTTAGAAAATGTAGTGGGGATGAAGAGACACGTGGAGGAAATTGATTTAGAAAAATTGCCTTACTTGAACATGGTGGTGAAGGAGACACTACGATTACATCCGGTTGCACCTTTGCTCGCGCCTCGTGAGTGTCGAGAAGACGTTACTGTTGATGGTTATTTCATAAAGAAAAAATCAAGGATCATGATAAATGCATGGGCAATAGGGCGGGATCCTAAAGTTTGGTATAATCCTGAGATGTTTGATCCAAATAGATTTGAGAATTGCAACGTTGACATTCGTGGAAATGACTTTCGAGTTATACCATTTGGTTCTGGTCGAAGAGGTTGCCCCGGGATTCATTTGGGTCTAACTACCGTTAAGCTTGTTCTAGCTCAATTGGTGCATTGTTTTAATTGGGTGCTTCCATTGGACATGTCTCCTGATAAGTTAGACATGAATGAGATATTTGGACTCACAACGCCAAGAAGTAAGCATTTGCTAGCCATACCAGCTTATCGACTAGTTGGTTAA 1509 0.4433 MLLETLAIPTIVLLLIFILVVVHPKQPHGKTAPGPKALPIIGNLHMLGKLPHRTLQILARKYGPIMSLKLGQVQAIVVSSPETAELFLKTHDTVFASRPRIQASESLCHGSKGLAFSEYSAYWRNVRKVCTLQLLSASKVEMFSPLRKEELGVLVKSLKNSAASREVVDLSEELGELMENIVYKMILGRSNDDRFDLKGLIHEVMNLVGAFNLADYMPWLGTFDPQGITRRLKKASKAFDQVLEQIIHDHEQNPYDKEPKAPRKKDFVDILVSLMHQPIDLQDHQNVIDRTNIKAILLDMIAATFDTSSTTVEWAMSELLRHPSVMKRLQDELENVVGMKRHVEEIDLEKLPYLNMVVKETLRLHPVAPLLAPRECREDVTVDGYFIKKKSRIMINAWAIGRDPKVWYNPEMFDPNRFENCNVDIRGNDFRVIPFGSGRRGCPGIHLGLTTVKLVLAQLVHCFNWVLPLDMSPDKLDMNEIFGLTTPRSKHLLAIPAYRLVG 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03067 502 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 Coils Coil 160 180 - -
Pumo6g03067 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Pumo6g03067 502 FunFam Cytochrome P450 83B1 19 495 - -
Pumo6g03067 502 CDD CYP71-like 61 492 - -
Pumo6g03067 502 Pfam Cytochrome P450 33 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g03067 502 PANTHER CYTOCHROME P450 93A3-LIKE 10 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03067 Pumo-Chr6 72918302 72924489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03067 3 501 Monolignol Biosynthesis Gene Families AT4G36220 39.689 1.19e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03067 - - gmx:100782715 856.67