Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03054 ATGTTTACTGTGTGTGCAATCAGATATCAGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTACTGATTCTGCTGTTTTTGCCATGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTGAAGTCCTACTGAATGAGCTGAGATCCCCATCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGCGGCGTTGGTTCTCTTCATGTTGTCAATCCAACATTTGACTACGTGCCACCAAAACTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAACCCGTCGTATATGTACCGGCTCATAGCTGATTACTACTCAGCTGATGATTTGGTGGTGAAACGAAGACCTACTGCAGGGAGTTGA 537 0.4488 MFTVCAIRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGVGSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPTAGS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03054 178 Pfam Initiation factor 2 subunit family 9 152 IPR000649 GO:0044237
Pumo6g03054 178 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 167 IPR037171 -
Pumo6g03054 178 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 5 169 - -
Pumo6g03054 178 FunFam translation initiation factor eIF-2B subunit beta 1 163 - -
Pumo6g03054 178 Gene3D - 1 162 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03054 Pumo-Chr6 72728008 72729977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03054 6 170 Eukaryotic Initiation Factors Gene Family AT3G07300 90.909 5.50e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03054 K03754 - gmx:100778545 340.502