Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03047 ATGAATCCACCATCAAATAACCACACCACAGATCCCAAAGACTTGGGCAATTCAAGTGCCAATTTCAACGGAGTTCACTCACTCCAGGGGAAGGTCTTGTCCGAGGCAAAGTTTCAACGTGTTTTGCATAGCCCAGTTATGACAGAGCCATCAAATACATTAATAAGCCAGGTAGGTCATAAGTTTCCTGAGGTGTTTCGACTGAGACAAGGAAGTTATGCAGATCTTCCTTCAGCAAAAATTTCAGAATTGATGAAATCAACTAGTTTGGATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGCATCTTGGAAGAAAGTGTTGAGAGAAGAAATGGTGAAATACCCCATCGTGTGGCTTGTTTATTGAGAAAAGTTGTCCAAGAGATTGAGCGACGTATATCAACTCAAGCAGAACATTTAAAAACTCAAAACAATCTTTTTAAGGCTCGTGAAGAAAAATATCACTCAAGAATCAAAGTACTCGAGACTCTTGCATCCGGAACCAAGGAAGAGAGTGAGGCTGAGAGGACTAAAAAAGAAGAAAAGAAGGCAGATGAATCAAAACAATCTGAGAAGACTAAAATGGAAGAAGAGAAGGAAAATGTCTTAAAACATATTGAGAATACCAAAAAGATGGCAGATGACAAAGAGGTTATTAAATATATTAAAGAGTTGGAGGACAAAAATATGGAAGTTTCGACATTGAAGCAAAAACTAGAAACAATGAAAAAAACATATGAAGTGCAATGCTCACAATTGGAAGCAAAAGCTGAGGAGAAAAAAATGGCAGGTGACAAAGAGGTTATTAAATATATTAAAGAGTTGGAGGACAAAAATATGGAAGTTTCGACATTGAAACAAAAACTAGAAACAATGAAAAAAACATATGAAGTACAATGCTCACAATTGGAAGCAAAAGCTGAGGAAAAAAAAATGGCTGATGACAAAGAGGTTATTAAATATAATAAAGAGCTGGAGGACAAAAATATAGAAGTTTCAACATTGAAGCAAAAACTAGAAACGATGAAAAAAACATATGAAGTACAATGTTCACAATTGGAAGCAAAAGCTGAGGAGGAAAAAAGGGCAAATGACAAAGAGGTTATTAAATATATTAAAGAGTTGGAGGACAAAAATGTGGAAATTTCAACATCTAAGCAAGAACTAGAAACAATGAAAAAAACATATGAAGTACAATGCTCACAATTGGAAGCAAAAGTTGAGGATGCTAAAGGAGAATTGAAACATAAATCACAAGAATATGAACATCTGTTGGAAAAAATAAGAAATAAGGTTAAAGAGAATGAAGCCCTTTATGAGTCAAAGTATCAAAAGTGGATCATGAAAGAGAACCAAATACGAAAAGATGTGAATTTTCAGTTTAGTTCCATACAGAAATTGAAACTATCATGGGAATCCATTAAGCAAGATGCTATCAAAGAGCAAATGATTTATTCTGAGGAATGTAATCGATTAGGTGTAAATCTTAAATCACTAGTAGATGCAGCTGAGAATTATCAAACAGTTCTTGCAGAAAATCGAAAATTGTTCAATGAAGTTCAAGAATTAAAAGGAAATATCAGAGTGTATTGTCGACTCAGACCAATTCTACCTGGACAAAAGGAAAAACAATCTATTGTGGAACACATTGGTGAAACTGACTTGGTTGTGGCAAATCCCTCCAAACAAGGAAAAGAAGCCCTTAGAACATTTAAGTTCAACAAGGTCTTTGGGCCAGTCTCAACTCAAGCTGAGGTGTATGCTGACATACAAGCCTTTATACGATCAGTACTTGATGGGTTTAATGTATGTATATTTGCTTATGGCCAGACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAGCTGAGAGTGTTGGTGTTAACTATCGAGCTCTTAATGACCTCTTCAGCATATCCACAAGTAGAAGAAGCACCATAGTGTATGACATTGGGGTTCAAATAATTGAAATATATAATGAACAAGTGCGCGACTTGTTATCAGTTGATGCTTCTCCAAAAAAACTTGGGATATTAAGTCATTCTCAACCAAATGGATTAGCAGTACCTGATGCTACCATGCTTCCTGTGAAATCAACTTCAGATGTCATTAAGTTAATGGACATTGGCCTAAAAAATAGAGCCAAGGGTTCCACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTAATGTTCGTGGGATGGATAAGAAGTCTGGTTCCTCCCTTCAAGGTAATCTTCATTTGGTAGATTTGGCGGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGTGATAGACTTAAGGAAGCACAACATATTAACAAATCATTATCTGCCCTTGGAGATGTCATTTTTGCACTTGCTCAAAAAAGTTCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTACAATCATCTCTTGGTGGTCAAGCCAAGACACTCATGTTAGTCCAAATTAATTCAGACGTTAAGTCTTTTTCTGAATCTCTAAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCTAAAAGTACCAAAGACGGCAGAGATGTCAGAGAATTAATGGAGCAGGTGGCTTCTCTTAAGGACACTATTTTGGTTAAGGATGAGGAGATTGAAAAGCTACAATTACTTAAGGATTTGAAAAATGTTTATCCTGGTGTCAATTCTGAGAATCCTGAAACTTCCTCTGAATGA 2754 0.3653 MNPPSNNHTTDPKDLGNSSANFNGVHSLQGKVLSEAKFQRVLHSPVMTEPSNTLISQVGHKFPEVFRLRQGSYADLPSAKISELMKSTSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAEHLKTQNNLFKAREEKYHSRIKVLETLASGTKEESEAERTKKEEKKADESKQSEKTKMEEEKENVLKHIENTKKMADDKEVIKYIKELEDKNMEVSTLKQKLETMKKTYEVQCSQLEAKAEEKKMAGDKEVIKYIKELEDKNMEVSTLKQKLETMKKTYEVQCSQLEAKAEEKKMADDKEVIKYNKELEDKNIEVSTLKQKLETMKKTYEVQCSQLEAKAEEEKRANDKEVIKYIKELEDKNVEISTSKQELETMKKTYEVQCSQLEAKVEDAKGELKHKSQEYEHLLEKIRNKVKENEALYESKYQKWIMKENQIRKDVNFQFSSIQKLKLSWESIKQDAIKEQMIYSEECNRLGVNLKSLVDAAENYQTVLAENRKLFNEVQELKGNIRVYCRLRPILPGQKEKQSIVEHIGETDLVVANPSKQGKEALRTFKFNKVFGPVSTQAEVYADIQAFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNGATAESVGVNYRALNDLFSISTSRRSTIVYDIGVQIIEIYNEQVRDLLSVDASPKKLGILSHSQPNGLAVPDATMLPVKSTSDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSINVRGMDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAAKSTKDGRDVRELMEQVASLKDTILVKDEEIEKLQLLKDLKNVYPGVNSENPETSSE 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03047 917 MobiDBLite consensus disorder prediction 168 203 - -
Pumo6g03047 917 MobiDBLite consensus disorder prediction 1 22 - -
Pumo6g03047 917 PANTHER KINESIN-LIKE PROTEIN KLP-3 269 893 IPR027640 GO:0003777|GO:0007018
Pumo6g03047 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 894 IPR027417 -
Pumo6g03047 917 Coils Coil 225 266 - -
Pumo6g03047 917 FunFam Uncharacterized protein 216 257 - -
Pumo6g03047 917 Coils Coil 195 215 - -
Pumo6g03047 917 Gene3D - 366 407 - -
Pumo6g03047 917 Gene3D - 317 357 - -
Pumo6g03047 917 Gene3D - 216 257 - -
Pumo6g03047 917 Gene3D - 267 307 - -
Pumo6g03047 917 ProSiteProfiles Kinesin motor domain profile. 529 856 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 Coils Coil 509 529 - -
Pumo6g03047 917 PRINTS Kinesin heavy chain signature 603 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 PRINTS Kinesin heavy chain signature 726 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 PRINTS Kinesin heavy chain signature 806 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 PRINTS Kinesin heavy chain signature 757 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 Coils Coil 172 192 - -
Pumo6g03047 917 SMART kinesin_4 527 864 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 Pfam Kinesin motor domain 535 854 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03047 917 Coils Coil 321 373 - -
Pumo6g03047 917 Gene3D Kinesin motor domain 472 858 IPR036961 -
Pumo6g03047 917 Coils Coil 275 316 - -
Pumo6g03047 917 Coils Coil 375 441 - -
Pumo6g03047 917 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 471 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03047 Pumo-Chr6 72634463 72640650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03047 517 856 Calmodulin-binding Proteins AT5G65930 37.500 3.15e-65 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03047 K10406 - gmx:100779403 1488.01