Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03031 ATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCCGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTAGAAAATACAAACAATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCTGTCCAAATTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGATTCCGGAAGATTCATGTCAGGCTTGTGAGAGAACTTGAGAAAAAGTTTAGTGGAAAGGATGTGATCCTGATTGCCACCCGGAGGATATTAAGGCCACCAAAGAAAGGTTCTGCTGCTCAGCGTCCCCGCACCCGAACACTCACTGCTGTACATGAGGCAATGCTGGAAGATATTGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAGAATTGATGGTTCCAAGATTATGAAGGTCCTTTTGGATCCCAAGGAGCGAAACAACACCGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAATTTTCGGGCAAAGATGTTGTGTTTGAGTATCCTACTACCGAGGCTTAG 576 0.4323 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVLLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPTTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03031 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pumo6g03031 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pumo6g03031 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pumo6g03031 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03031 Pumo-Chr6 72447746 72450911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03031 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.010 7.78e-112 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03031 K02993 - gmx:100499757 368.622