Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03022 ATGGCTGCGAAAAGGTTTTTCAATGATTCTGATCAAGACCCCGATAAGCCTGGCGACAAACGGATGAGAAATACTAGACCTTCTTTTGCTTCAGTAATAGGAGAAGTGGTTATGGTGAAAAACTTGGAGAACCTTTTCTCCGCCATGGAACCTTTGCTTAAAAGAGTAGTTGGGGAAGAAGTTGACCGAGTTATGAGACAATGGTCACGCACCTTTGCTAGGTCTCCATCACTGAGGCTCCAAGCAATGGAGCAACCTTCAACTTTGCAACTAAGGTTCAGCAAAAGGCTTTCCCTTCCAATTTTCACGGGTAGCAGGATTCTTGACGTTGATGGGAACCCCATCAACATAGTTCTGATGGACAAGAGCAATGGCCAAGTGGTCCCCACAAGTCTCCCACATGCCATCAAGCTAGAGATTGTGGTTCTTGATGGAGATTTTCCTCCCGATGATAATGAGGATTGGACTAGTGAGGAGTTCAATAGGCGCATAGTGAAGGAGAGGAATGGGAAGCGACCATTGCTTGCAGGAGAATTGAACCTTATCATGCGTGATGGAGTTGCACCAACTGGGGACATTGAGTTCACTGATAATTCTAGCTGGATTCGCTGCCGGAAGTTCAGAGTTGCGGTGAGGGTGGCGCCGAGTAATCAAGGCGGTGTTCGGATTCGTGAAGGCATGACTGAGGCCTTTGTTGTTAAGGATCACCGTGGAGAATTGTACAAAAAACACCACCCTCCAATGCTTCATGACGAAGTATGGCGCCTAGAGAAGATAGGTAAAGATGGAGCTTTCCACAGAAAATTGTCATCAGAGGGGATCAAAACAGTGCAAGACTTTCTCAAGCTAGCAGTTATCGATACTCTTAAGCTAAGAAATATTTTAGGCATGGGGATGTCAGATAAAATGTGGGAAGTCACTATCAAGCACGCAATGACTTGTGACATTGGGAGCAAGATGTACATTTATCGTGGACCAGAGTTCACTATTTTTCTGGATCCAGTATGCAAATTAATTAGAGCAGATGTCAATGGACACACATTTTCCAACAGAGATCCGATGAGCCATCTGAATAAGGCCTATATAGACAAATTGGTGAGAGAAGCATATGCGAGATGGAATAGCTTGGAAGAGATTGACGGAGTTCTGAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACCGTGGATCAATTTGCAAACAATCAACCTACAGCATCTGCAGTCACATATAATCAGAATCAGTATTACAGTGACAAATCTGCCAGCTATGTAGCAAATAACAATACACAAATGGGGTGCTGCGAGTGGTCACCGAATCAAGCCTATAGCCCAGCACCGTTTGCCAATTTCTTTCCTTTTAATTTCCCAGTGACACAATCAGATGGTGACATACCCGCTTCAGGTTCCAGCTCTGTGGATGTTGTTGATGGGGCCACAAGGCAGAATTAA 1455 0.4447 MAAKRFFNDSDQDPDKPGDKRMRNTRPSFASVIGEVVMVKNLENLFSAMEPLLKRVVGEEVDRVMRQWSRTFARSPSLRLQAMEQPSTLQLRFSKRLSLPIFTGSRILDVDGNPINIVLMDKSNGQVVPTSLPHAIKLEIVVLDGDFPPDDNEDWTSEEFNRRIVKERNGKRPLLAGELNLIMRDGVAPTGDIEFTDNSSWIRCRKFRVAVRVAPSNQGGVRIREGMTEAFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHRKLSSEGIKTVQDFLKLAVIDTLKLRNILGMGMSDKMWEVTIKHAMTCDIGSKMYIYRGPEFTIFLDPVCKLIRADVNGHTFSNRDPMSHLNKAYIDKLVREAYARWNSLEEIDGVLNDNIALLTQGDQTVDQFANNQPTASAVTYNQNQYYSDKSASYVANNNTQMGCCEWSPNQAYSPAPFANFFPFNFPVTQSDGDIPASGSSSVDVVDGATRQN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03022 484 Pfam Calmodulin binding protein C-terminal domain 319 379 IPR046829 -
Pumo6g03022 484 PANTHER OS02G0177800 PROTEIN 2 432 IPR012416 GO:0005516
Pumo6g03022 484 Pfam Calmodulin binding protein central domain 248 314 IPR046830 -
Pumo6g03022 484 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g03022 484 MobiDBLite consensus disorder prediction 464 484 - -
Pumo6g03022 484 MobiDBLite consensus disorder prediction 8 23 - -
Pumo6g03022 484 Pfam Calmodulin binding protein-like N-terminal domain 89 236 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03022 Pumo-Chr6 72252649 72258240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03022 7 381 Calmodulin-binding Proteins AT5G57580 46.982 1.52e-115 352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03022 6 72252649 72258240 Pumo6g03022 6 72252649 72258240 ECH