Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03013 ATGTTCCGCACTCTCCCTCTACTCTTTCTCTTCTCTCTAACGCCCACTCTTCTTCTTCCAAGTAGCAGTGATGTCAATTTTAACACTTCGTCTGTGTTTGAGGGTAAACATCACTCAAACTGGGGATCGACAAGAGTAAAAATTGTCGACAAAGGCAGTAAGGGGCGCCCCCGTAAAGTCGATTATGTCTTCATGGTGTACAATGATAGGAAAAAGTGCAATAGTAGCGATGACACAAGCTTAAAGGGAAGTAATCATGGTGATTCTGCTAACGTGGTACGATTGCTTGAGGAAACTAATGTGACAGAACCATCAATACTACCGCCATCAATAAATGGAGCACAACCACTAGCTCAAGTACTAACAACTTTATTGCCTAGTCCTTCTTTGTCATCATCATCAATACCAACACCAGAACCAGTATCAGAACCGCCAATATTACCACCAACAACACCAGCACCAACATCTTTATCGCCCAGTCCTTCACCATCATCAACACCAACGCCAAAACTAGCACCAGAACCGCCATTACCACCACCAGCAACAAATGGAACACAACCACCAGCACAATCACCTAGTCATTCTTTGCCACCATCATCAATACAAAAACCAGTATCAGGTAACAACAAATTTCGGAAAAGGAAAGTCATTATAGGTGTTGTAATTGCAGTAATGGGAGGATTCATGATATGCATCATAATTTGTTGTTTTAAATATAAGTCATTAACCGGACCATTCAAATTTTGTTTGACCACAAAGAGCAAACTAGATATTGAAGCATTCTTAAAAATTCAAAGTGTTTTATCACAGAAGAGATACAAATTTTCAGAAGTCAAGAAAATTACCAATTCCTTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGCAGTATACCAAGGAAAGCTACACACTGGTTGCCTTGTGGCTGTAAAATTATTGAATGCATCCAAAGGAAATGGTGAAGATTTTATCAATGAGGTTGCTAGCATCAGTAGAACGTCTCATGTTAATATTGTCACACTTCTTGGATTTTGTTTGGAAGGCCGCAAGAAAGCTCTCATCTATGAGTTTATGGCTAATGGTTCCTTGGACAAGTTTATCTACAACAGAGGGCCAGAAACCATTGCATCTTTGAGTTGGCAGAATTTGTATCAAATCTCAATAGGTATAGCTCGAGGGCTGGAGTACTTGCACAGGGGATGCAACACTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTTTGCCCCAAGATATCTGATTTTGGGCTAGCAAAGCTCTGTCCCAGGAAAGAGAGCATTATTTCTATGTCAGATACTAGAGGAACAATGGGGTATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGAGTTTCACACAAGTCTGATGTTTATAGCTATGGGATGATGCTGCTAGAAATGGTAGGAGGGAGGAAGAACATTAATGCTGAAGCTAGTCACACAAGTGAGATATACTTCCCACATTTGGTATACGGAAGACTTGAGTTGGACAATGATGTAAGACCAGATGAGGTGATGACCACAGAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGATAGACCTACAATGAGTAGAGTGGTAGAAATGTTGGAAGGCAGCACGAATTCCTTGGAAATGCCACCAAAACCCATGCTTTCTTCCCCTACTAGATCAGTAACAGAATCTTCCTCTTGA 1752 0.4007 MFRTLPLLFLFSLTPTLLLPSSSDVNFNTSSVFEGKHHSNWGSTRVKIVDKGSKGRPRKVDYVFMVYNDRKKCNSSDDTSLKGSNHGDSANVVRLLEETNVTEPSILPPSINGAQPLAQVLTTLLPSPSLSSSSIPTPEPVSEPPILPPTTPAPTSLSPSPSPSSTPTPKLAPEPPLPPPATNGTQPPAQSPSHSLPPSSIQKPVSGNNKFRKRKVIIGVVIAVMGGFMICIIICCFKYKSLTGPFKFCLTTKSKLDIEAFLKIQSVLSQKRYKFSEVKKITNSFKVKLGQGGFGAVYQGKLHTGCLVAVKLLNASKGNGEDFINEVASISRTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDKFIYNRGPETIASLSWQNLYQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDTRGTMGYVAPEMCNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHLVYGRLELDNDVRPDEVMTTEENEIAKRMTIVGLWCIQTFPNDRPTMSRVVEMLEGSTNSLEMPPKPMLSSPTRSVTESSS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03013 583 ProSiteProfiles Protein kinase domain profile. 283 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03013 583 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Pumo6g03013 583 FunFam PR5-like receptor kinase 358 568 - -
Pumo6g03013 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Pumo6g03013 583 Pfam Protein kinase domain 286 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03013 583 SUPERFAMILY Protein kinase-like (PK-like) 266 557 IPR011009 -
Pumo6g03013 583 SMART serkin_6 283 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03013 583 MobiDBLite consensus disorder prediction 559 583 - -
Pumo6g03013 583 CDD STKc_IRAK 289 558 - -
Pumo6g03013 583 MobiDBLite consensus disorder prediction 128 207 - -
Pumo6g03013 583 Gene3D Transferase(Phosphotransferase) domain 1 358 567 - -
Pumo6g03013 583 MobiDBLite consensus disorder prediction 138 194 - -
Pumo6g03013 583 Gene3D Phosphorylase Kinase; domain 1 259 357 - -
Pumo6g03013 583 PANTHER RUST RESISTANCE KINASE LR10-RELATED 257 574 IPR045874 GO:0004672
Pumo6g03013 583 MobiDBLite consensus disorder prediction 565 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03013 Pumo-Chr6 71997670 72011010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03013 144 582 Receptor kinase-like Gene Family AT1G66980 48.894 1.96e-131 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo6g03013 Pkinase 8.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03013 - - gmx:100799800 695.656