Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03012 ATGTTTCGTACTCTCCCTCTCTTCTTCCTCTTCTCTGTAACTGCAACCCTTCTTCTTCCAAGTAGAAGTGATGCCAACTTTAACACTTCGTCAGTGCTTGAGGGTAAAAAGCTCTCAAAAATCGTCAACAAAGGCAGCAACGGGCGTCACCTTAAAGTCGATTATGTCTTCATGGCGTGCGATGATAGAAAAAATTGCAGCAGCAATGTCATCACACGCAAACCAGGACGTGATAGTGATTCTGCTTACGTGCCACGGGTACTTTATGACGTGTCACAAAACAGTACGGACCGTACGGCTATGCGTATGAGTAACCACCAATTTAGGGAAAGGAAAGTCATTATAGGTGTTGCAGGTGCAGTAATGGGAGGATTCACGATATGCATCATAATTTGTTGTTTTAGATACAACTCATTAACCCAAAAAATCAAACTTTGTTTGACCACAAAGAATGACCTAGATATTGAAGCATTCTTAAAAATTCATGAAGCTATAGCACAAAAAAGATACAAATTTTCAGAAGTCAAGAAAATGGCCAATTCCTTCAAAGTTAAACTGGGTCAAGGGGGTTTTGGTGCAGTATATAAAGGACAGCTACCCACTGGTTGTGCTGTGGCTGTAAAATTATTGAATTCATCCAAAGGATATGGGGAAGAATTTATCAATGAGGTTGCTAGCATCAGTAGAACCTCTCATGTTAACATTGTCACCCTTCTTGGATTTTGTTTGGAAGGCCGCAAAAAAGCTCTCATCTATGAGTTTATGGACAATGGTTCCCTTGACAAGTTTATTTACAAAAGAGGGACACAAACCATTGTATCTTTGAGTTGGGAGAATTTGTGTCAAATCTCAATAGGGATTGCTCGAGGGTTGGAGTACTTGCATAGGGGGATGCAACACTCGAATTTTACATTTTGA 918 0.402 MFRTLPLFFLFSVTATLLLPSRSDANFNTSSVLEGKKLSKIVNKGSNGRHLKVDYVFMACDDRKNCSSNVITRKPGRDSDSAYVPRVLYDVSQNSTDRTAMRMSNHQFRERKVIIGVAGAVMGGFTICIIICCFRYNSLTQKIKLCLTTKNDLDIEAFLKIHEAIAQKRYKFSEVKKMANSFKVKLGQGGFGAVYKGQLPTGCAVAVKLLNSSKGYGEEFINEVASISRTSHVNIVTLLGFCLEGRKKALIYEFMDNGSLDKFIYKRGTQTIVSLSWENLCQISIGIARGLEYLHRGMQHSNFTF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03012 305 ProSiteProfiles Protein kinase domain profile. 180 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03012 305 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Pumo6g03012 305 PANTHER RUST RESISTANCE KINASE LR10-RELATED 154 300 IPR045874 GO:0004672
Pumo6g03012 305 Pfam Protein tyrosine and serine/threonine kinase 182 296 IPR001245 GO:0004672|GO:0006468
Pumo6g03012 305 Gene3D Transferase(Phosphotransferase) domain 1 160 304 - -
Pumo6g03012 305 SMART tyrkin_6 180 305 IPR020635 GO:0004713|GO:0006468
Pumo6g03012 305 SUPERFAMILY Protein kinase-like (PK-like) 168 296 IPR011009 -
Pumo6g03012 305 FunFam serine/threonine-protein kinase PBS1-like 149 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03012 Pumo-Chr6 71989901 71995261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03012 105 295 Receptor kinase-like Gene Family AT4G18250 48.187 8.51e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo6g03012 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03012 - - gmx:100800335 426.402