Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03011 ATGTCAGATACTAGAGGGACAATGAGGTATGTAGCTCCAGAAATGTGGAATAGACATTTCGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGGATGATGTTGCTAGAAATGGTAGGAGGGAGGAAGAACATTAATGCTGAAGCCAGTCACACAAGTGAGATTTACTTCCCTCATTTGGTATACAAGAGGCTTGAGTTGGACAACGATGTAAGACCAGATGAGGTGATGACCAGAAAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGATAGACCTACAATGAGTAGAGTGATAGAAATGTTGGAAGGCAAGATGAATTCCTTGGAAATGCCACCAAAACCTTTGCTTTCTTCTCCAACTAGATCGGCAACAGAATCTTCCTCTTGA 426 0.4038 MSDTRGTMRYVAPEMWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHLVYKRLELDNDVRPDEVMTRKENEIAKRMTIVGLWCIQTFPNDRPTMSRVIEMLEGKMNSLEMPPKPLLSSPTRSATESSS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03011 141 SUPERFAMILY Protein kinase-like (PK-like) 3 135 IPR011009 -
Pumo6g03011 141 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03011 141 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 136 IPR045874 GO:0004672
Pumo6g03011 141 Gene3D Transferase(Phosphotransferase) domain 1 1 130 - -
Pumo6g03011 141 MobiDBLite consensus disorder prediction 121 141 - -
Pumo6g03011 141 Pfam Protein kinase domain 2 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03011 Pumo-Chr6 71989022 71989800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03011 1 140 Receptor kinase-like Gene Family AT1G66980 53.103 2.44e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo6g03011 Pkinase 2.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03011 - - gmx:100800335 246.514