Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03008 ATGGATCAACTGGGGGTTGATCAACTGCATCCCAACGACCCTGCAACGTTTGGTAATTACCTCATGAGATTGAGGTGTGATCTCTTTGTGTGCTGCTTTTCTAGCACATCTTCAGACACAATTCCAAAGGCAAAGCAAAATATCTCAGCTTTGAAAATCTTCAACCGTGCTGAACTTGAAGAAGCTACTAACAAATTTGACACTTGCCTTGGAAAGGGAGGCTATGGCAGTGTGTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAGTAAAATGTTTCCATGACGAGAACGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGAGATCTTAGGTCTCTTGCACCATAAAAATCTGGTTTTGCTTTATGGCCGCACTTCTCGCCATTGCAACAAACACATGCTAGTGTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCCCACGTGGCAGAGTTAGCATTTTTGTGTGTGCAGTCTCCCAAGGAATTCAGACCATCCATGAAAGAGGTGCTAGAGACCCTGGAGGGCATAAGGAATGGAACATGGGGATTCAACCAGATAACATAG 594 0.4343 MDQLGVDQLHPNDPATFGNYLMRLRCDLFVCCFSSTSSDTIPKAKQNISALKIFNRAELEEATNKFDTCLGKGGYGSVYYGKLQDGREVAVKCFHDENETEETIKQFMKETEILGLLHHKNLVLLYGRTSRHCNKHMLVYEYISNGTLTKHLHESSHVAELAFLCVQSPKEFRPSMKEVLETLEGIRNGTWGFNQIT 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03008 197 Gene3D Phosphorylase Kinase; domain 1 36 142 - -
Pumo6g03008 197 SUPERFAMILY Protein kinase-like (PK-like) 47 156 IPR011009 -
Pumo6g03008 197 Pfam Protein tyrosine and serine/threonine kinase 66 155 IPR001245 GO:0004672|GO:0006468
Pumo6g03008 197 ProSiteProfiles Protein kinase domain profile. 64 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03008 197 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 157 190 IPR044652 GO:0004672
Pumo6g03008 197 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03008 Pumo-Chr6 71883366 71886653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03008 51 153 Receptor kinase-like Gene Family AT1G25390 54.286 1.50e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pumo6g03008 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03008 - - gmx:100801413 194.897