Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02995 ATGAGCGAAAGCACAGAGACCCAGAAGCGCGAAGCTTCTGATTCAGAGAGCAAGGAGAATGCTGTTGCGTCTAAGAAGCCAAAGATCGAACCTTGTGGAACGGGTACCGATGGCAATGCCGTAAAGGAACCATCTTTCCTCATTGAAGCTGATGCAGCTGAAGATAAGGGGTCGAGGCACACCATGGAAGATGCGTGGGTCGTGCTTCTCGACGCAAGTTTAGATTACCCTGGAAATTTGAGATGTGCACACTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATCAGAATGTTCTTTCAGCAGGATTACCACGTGAGTTGTTTGATGCAAAGGCAGCTAAACGATCTATTCTGAATGGTTTCCTTAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCCGAAGGGGGATGGCAGGATGGTGCTACAGCCGTATCTGTTTGGGTATTGGGACAAAGAGTTGTGGTTGCAAATATAGGAGATGCAAAGGCAGTATTAGCTCGGTCAACTGATAGATCCCGAAATCGCCCAGATGGTGCCCAGGTGCTGAAGGCCATTGTTTTGACTAGAGAACACAAACCTATCTTCCCTCTCGAGCGTGCACGCATTGAGAAGTCAGGTGGTTTTGTGAGCCCAGATGGACGATTACTAGGGCGTCTAGAAATTTCTAGGGCTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTGTTGTTGCAACCCCAGATATGTATAATTTTGAAGTTACTGATACAGAGCATTTCATCATTCTTGGTTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAACGAGGGGCTACCTGTTGCCACTGTGAGCCGCCGTCTTGTTAGGGAGGCTGTTCGTGAGCGCCGCTGTAAAGATAACTGCACTGCCATTATCATTGTATTCAAGCACAATTAA 975 0.4667 MSESTETQKREASDSESKENAVASKKPKIEPCGTGTDGNAVKEPSFLIEADAAEDKGSRHTMEDAWVVLLDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVLSAGLPRELFDAKAAKRSILNGFLKTDESLLQESAEGGWQDGATAVSVWVLGQRVVVANIGDAKAVLARSTDRSRNRPDGAQVLKAIVLTREHKPIFPLERARIEKSGGFVSPDGRLLGRLEISRAFGDRQFKKVGVVATPDMYNFEVTDTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVSRRLVREAVRERRCKDNCTAIIIVFKHN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02995 324 Gene3D - 35 324 IPR036457 -
Pumo6g02995 324 CDD PP2Cc 53 321 IPR001932 -
Pumo6g02995 324 SMART PP2C_4 38 319 IPR001932 -
Pumo6g02995 324 ProSiteProfiles PPM-type phosphatase domain profile. 49 321 IPR001932 -
Pumo6g02995 324 Pfam Protein phosphatase 2C 53 309 IPR001932 -
Pumo6g02995 324 PANTHER PROTEIN PHOSPHATASE 2C 18 319 IPR015655 GO:0004722|GO:0006470
Pumo6g02995 324 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g02995 324 MobiDBLite consensus disorder prediction 1 41 - -
Pumo6g02995 324 SUPERFAMILY PP2C-like 46 322 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02995 Pumo-Chr6 71688002 71692612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02995 46 273 PP2C-type Phosphatase Gene Family AT1G18030 73.043 4.29e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02995 K17500 - gmx:100815852 593.193