Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02966 ATGGTGATAACCACTGGACTCACTAGCTTAATTCACATTCTCCTCTGTTGGGCTTTTGTTCAGAAACTTGGGCTTGGTTTCAAAGGATCTGCCATTGCAATTTGCGTTTCAAATTGGTTTAATACCATACTGCTGGCACTCTATATTCTGTTCTCCCCTTCATGCAAAACAACTTGGACTGGCTTCTCAAAGGAATCATTACATAACATCCCAAAATTTCTCAAACTTGCTTTTCCTTCAGCACTCATGGTGTGCTTAGAAGCATGGACGTTTGAAATAATGGTGCTCTTGTCTGGTGCTCTTCCTAATGCGAAATTGCAAACTTCTGTGCTTTCTATATGCCTTAACACAACTGGTATATTTTGGATGGTACCATTTGGAGTTAGTGCTGCTGGAAGCACAAGGATCTCAAATGAATTAGGGGCTGGTCGTCCAGAAGCTGCATATTTAGCAGTTAAAGTGACCATGTTCTTGGCCTCTGCAGTGGGGCTTTTGGAATTTGCTGCCCTTATGTTGGTACGCAAAGTTTGGGGCCATGCTTTTACCAATGTACATGAAGTGGTCGCATATGTGACTGCCATGATCCCAATTGTTGCAAGCTCTGCCTTTATAGATTCAATTCAAACAGCATTTCAAGGTGTTGCTAGAGGATGCGGCTGGCAGAAACTTGGTGCATTATTCAATCTAGGATCTTATTATTTTCTAGGTGTTCCTTTTGCAGTCGTGACAGCTTTTGTCCTCCACATGAAAGGCCAGGGGTTACTTTTAGGGATCGTATTAGCACTTATTGTGCAAGTGGTGTGTTTTCTAGTGGTCACCTTACGCACCAATTGGGAGAAAGAAGCAAATAAGGCAGCAACAAGAGTAGGAGGCAGTAGAGTCCAAGTTGAGGCAGAACTTCAGGGTAACCAAAATGTTAATACTGCTTGA 930 0.4258 MVITTGLTSLIHILLCWAFVQKLGLGFKGSAIAICVSNWFNTILLALYILFSPSCKTTWTGFSKESLHNIPKFLKLAFPSALMVCLEAWTFEIMVLLSGALPNAKLQTSVLSICLNTTGIFWMVPFGVSAAGSTRISNELGAGRPEAAYLAVKVTMFLASAVGLLEFAALMLVRKVWGHAFTNVHEVVAYVTAMIPIVASSAFIDSIQTAFQGVARGCGWQKLGALFNLGSYYFLGVPFAVVTAFVLHMKGQGLLLGIVLALIVQVVCFLVVTLRTNWEKEANKAATRVGGSRVQVEAELQGNQNVNTA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02966 309 NCBIfam MATE family efflux transporter 3 254 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo6g02966 309 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 278 - -
Pumo6g02966 309 Pfam MatE 79 242 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo6g02966 309 CDD MATE_eukaryotic 1 284 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02966 Pumo-Chr6 70424458 70427330 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02966 K03327 - gmx:100793135 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g02251 2 47823332 47830487 Pumo6g02966 6 70424458 70427330 ECH
Pumo6g02966 6 70424458 70427330 Pumo6g02966 6 70424458 70427330 ECH