Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02934 ATGCGTCATCCAATAGTCCCTCGATCTTTGTCCTCCAATTCCCCTTCCAGATCCGACAAGAAAAAACCTAAATCCGCCAATAATCAAACCCTAGCCTCCGCTGCCGCCGCCGGCGGAGGTGGCGGAGGACTCGCCGCGTGCCGGCAGACGCAGGTCAAGGATGGAACTAAGAAGAAGGATGTGATCAAGGGGAAAGAAAGTCAAACGCCGCCGCCGGAGGCTCGCAAGGATTCTCCAGCGAAGAAGCTGACGGCGGCGGCGGCGGAGGGACGGGAGTCGTCGTCGTCGGTGTCGCCGATTCTGGCGTCGTCGCTGGGCCTGAACAGGATCAAGACGAGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTCGGATTCAGGGGCGAGAAGGCGACGGCGGCGCTCGGCGGCAGCAACCTCTCCCGGCCGGGTGTCGGTGTCCGAGCCGGCGATGGAAAGAAGAAGGAGGTGGCGAGCCAGAGCAAGGTGGGGTTTCACGAGGGTTCCGTCGGCGGTGCCGTTGCCGGAGGTTGGGGCGATAACGGGAGCAATTCCGATAGCGTGTCGACGTCGGGGAGCTTGCCGTCGAGGGAGCAGAGTCCGGTCGTGTTGCCGCGGTCGCGGTTGCAGAACGGAGAATCATCTTCGGAAGCTGCAGGCAAACAGGCATCATCATGGGCTCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCAGAGACAGCATATGATTTTGAAAACCCAAAGGAGTCCGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACTAGTGCACCCAGGAAGAGGTTTCCTTCGGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTCGAAGCCTCGACGGTTAAATAACCTTGAGGAGATTTTGGTTGTTATTAGGGCAAAATTTGATAAAGCAAAGGAAGACGTGAACTCTGATCTGGCTATTTTTGCGGCAGACCTGGTTGGTATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCCAGGAGCTGTGCTATGACTTCATCTGGTGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATCCTCACAAGGTGTACCCGATTATTACAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTCCGTCAATCTAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATACTAAAAGTTCAAGTGCTGCAAAGGCCTTAAAGCCTGCATCGAAAAAAGCTTTTAGTCAAGAGCAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCAGAAAATCTATCGGTTCCTGCTGATGATGACAATGCAAAACACTTTGACTCTTCTTCAGGCAGGAATCGAATGTCTTCTTGGAAGAAGTTCCCTTCTCCAACGGGAAGAAGCCCTAAAGAAGCTGGTCAGTTGAAGGACCAACATTATGGGAGGGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCACTTCCTATGTGGATCTCTCTACTGCTAAGCCATCTGAGCTTCTTCCTGTCAAAGATTCCTTGGATCATGCTTCCAAACACCAACACAAAGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAATAGCGAGGATAATTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGCAGGGATTGAGTGTCAATGAGCGTCTAGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAATCATGTACACAAAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCACCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGACATGCTAGACTGTTTCCCTGAAGCTGACAATTCTGCTTTTATGGATGACCTAAAAGGATTACCACTTATGTCATGTAAAACTCGTTTCGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCCAGGTCTCCGTTGATGACACCACGGACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTCCTTATTCTGAACACGATGATCTGCCACAGATGAATGAACTTGCTGATATAGCGCGCTGTGTGGCAAATGCACCTTTGGATGATGATCGCACGACGTCATATTTATTATCTTGTCTTGATGATTTGCGGGTTGTTGTAGAAAGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACTCGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACTGTTGATGATGATCTCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAACCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGTGAGAACTTATATCTTGTCATGGAATATCTTAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGCCTAGATGAGGAAGTCGCCCGTGTATATATTGCAGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCAATGCGTGTGGTTCATCGTGACTTGAAGCCCGACAATTTATTGATAGCGCATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCCGGTCCAGCAGTGAATGGGACATCCCTACTTGAAGAAGATGAAACTGATGTATTTACATCCGAGGATCAAAGGGAAAGGAGGAAGAAACGTTCTGCAGTTGGCACACCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGGGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCACCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCAGCAGTTCCTGAAGAGATGAGTCCTGAAGCACAGGATCTTATTGATCGACTATTGACAGAAGATCCTAATCAAAGACTAGGATCCAAAGGGGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCGTGGAATACTTCTGATGGCTTTGTATATCCAGCAAGTGATGTCGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGACAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCCGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTTAGTAATTTCTCTTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGACCCGCCAACGAATTCTAGTGCATAG 3846 0.4602 MRHPIVPRSLSSNSPSRSDKKKPKSANNQTLASAAAAGGGGGGLAACRQTQVKDGTKKKDVIKGKESQTPPPEARKDSPAKKLTAAAAEGRESSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKATAALGGSNLSRPGVGVRAGDGKKKEVASQSKVGFHEGSVGGAVAGGWGDNGSNSDSVSTSGSLPSREQSPVVLPRSRLQNGESSSEAAGKQASSWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFSKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDTKSSSAAKALKPASKKAFSQEQSMMGWKKDVMQPENLSVPADDDNAKHFDSSSGRNRMSSWKKFPSPTGRSPKEAGQLKDQHYGRVESSKASNNKRFTSYVDLSTAKPSELLPVKDSLDHASKHQHKVSWGYWGDQQNNNSEDNSIICRICEEEVPTSHVEDHSRICAVADRCDQQGLSVNERLVRIAETLEKMMESCTQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKGLPLMSCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGPYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSMRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGFVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02934 1281 Gene3D Transferase(Phosphotransferase) domain 1 954 1177 - -
Pumo6g02934 1281 SUPERFAMILY Protein kinase-like (PK-like) 867 1199 IPR011009 -
Pumo6g02934 1281 SMART serkin_6 870 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02934 1281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 989 1001 IPR008271 GO:0004672|GO:0006468
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 495 509 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 52 82 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 713 736 - -
Pumo6g02934 1281 Pfam Protein kinase domain 870 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 642 671 - -
Pumo6g02934 1281 Coils Coil 297 317 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 132 233 - -
Pumo6g02934 1281 PANTHER SERINE/THREONINE-PROTEIN KINASE 577 1253 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 715 736 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 1 102 - -
Pumo6g02934 1281 ProSiteProfiles AGC-kinase C-terminal domain profile. 1160 1264 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 434 534 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 179 231 - -
Pumo6g02934 1281 Gene3D Phosphorylase Kinase; domain 1 868 1188 - -
Pumo6g02934 1281 MobiDBLite consensus disorder prediction 642 680 - -
Pumo6g02934 1281 CDD STKc_MAST_like 876 1164 - -
Pumo6g02934 1281 FunFam probable serine/threonine protein kinase IREH1 868 957 - -
Pumo6g02934 1281 ProSiteProfiles Protein kinase domain profile. 870 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02934 Pumo-Chr6 69675331 69687955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02934 45 1275 AGC Kinase Gene Family AT3G17850 66.799 0.0 1612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Pumo6g02934 Pkinase 2.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02934 - - gmx:100816852 2328.52