Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02933 ATGCAACAACATTCTCAGACCCTCTTCACCACCATAATCCTCTTTCTGTTTTTCTTCCTCCCTTCAACATTTTCTGACATCTCATCGGAGCGAGCGGCGCTCCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACCCTCCTCTGGAACGCCACCGCCCCCTCCCCCTGCGCCTGGCCCGGCGTCCAATGCGACGCCGCCAACGCCACCGTCCTCGAGCTCCACCTCCCCGCCGTCGCGCTCTCCGGCGAGCTCCCCGCCGGCGTGTTTCCGGCTCTCCGGAACCTCCGCACCCTCAGCCTCCGCGTCAACTCCCTCTCCGGCACCCTCCCCGCCGACCTCGCCTCCTGCGCCGCCCTCCGCAACCTCTTCCTCCAGCAGAACCACTTCTCCGGCGAGGTTCCGGCGTTCCTCTCCGGCATGACCAACCTCGTCCGCCTCAATTTGGCCTCCAACAACTTTTCCGGTCCAATTCCGGCCCGGTTCGGGAACCTCACCCATTTGAGGACCCTTTTCCTTGAGAACAACCGGTTCAACGGTTCGCTTCCCGGGTTGGAAAAACTCGATGAGTTGGCTCAGTTTAATGTCTCTTTCAACATGCTGAACGGTTCTGTGCCTAAAAAGTTGCAAACTTTTGGTGAAGATTCGTTTTTGGGGAATACCCTTTGTGGGAAGCCACTTGGGATTTGTCCTTGGGATGATGGGGGTGGTGCAAATGGGAGTTCAAATTCAAGTGGGGTTGGAGGGGGTGAAGGGAGTGTGATTGGAGGGGACAAGAAGAAGAAGGGGAAGCTTTCTGGGGGTGCAATTGCTGGGATTGTTATTGGGAGTGTGGTGCTTCTTTTGTTGGTTGTGTTTGCTTTGATTCTCTTGTGTAGAAGTGGGAACAAGACTAGGAGTGTTGATAATGTTAATAACATTGTGGGGTTGAAGGAGGAGCAGCAACAGCATGGGGAAGTGGGAATTGAGAGTGGCAATGTGGAGAATGGTGGTGGTGGTGGTGGTGGTGGGAATTCGGTGGCCGCCACCGCCGCCGCAGCAATGGCGGCAGTGAGTGGTGGTGGTGGTGGTGGTGGTGGTAGAGGAGGAGATAAGAAGTTGGTGTTTTATGGTAATAAGGTGAAGGTGTTTGATTTGGAGGATTTGCTAAGGGCCTCTGCTGAGGTGTTGGGGAAAGGGACTTATGGGACTACCTATAAGGCTGTTTTGGAGGATGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACGGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGGGGTGGGAGTGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCATTGAATTGGGAGATGAGATCAGGCATTGCACTAGGAGCTGCTCGCGGCATCGAGTACCTACATTCACAAGGGCCTAGTGTTTCTCATGGAAACATAAAGACCTCCAACATCCTCCTAACCAAGTCATATGATGCCAGGGTGTCTGATTTTGGCCTTACACACCTTGTTGGCCCTTCATCCACGCCCAACAGGGTTGCCGGCTACCGCGCTCCAGAAGTAACCGATCCGCGCAAAGTGTCTCAGAAGGCTGATGTATACAGCTTTGGAGTGTTGCTCTTGGAACTTCTCACAGGAAAGGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAGCTCCTTAGGTATCAGAATTCTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGCCCTTCAATGTCTCAAGTAAGACAACGCATAGAAGAGTTACGTAGGTCTAGCATGAAAGAGGGTACTCAAGACCAAATCCAACAACCTGATTTGATCAATGATATAGATGATGTGTCTTCTAGATGA 2043 0.5237 MQQHSQTLFTTIILFLFFFLPSTFSDISSERAALLALRSAVRGRTLLWNATAPSPCAWPGVQCDAANATVLELHLPAVALSGELPAGVFPALRNLRTLSLRVNSLSGTLPADLASCAALRNLFLQQNHFSGEVPAFLSGMTNLVRLNLASNNFSGPIPARFGNLTHLRTLFLENNRFNGSLPGLEKLDELAQFNVSFNMLNGSVPKKLQTFGEDSFLGNTLCGKPLGICPWDDGGGANGSSNSSGVGGGEGSVIGGDKKKKGKLSGGAIAGIVIGSVVLLLLVVFALILLCRSGNKTRSVDNVNNIVGLKEEQQQHGEVGIESGNVENGGGGGGGGNSVAATAAAAMAAVSGGGGGGGGRGGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTYGTTYKAVLEDGPVVAVKRLKDVTVSEKEFKEKIDGVGVMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSGIALGAARGIEYLHSQGPSVSHGNIKTSNILLTKSYDARVSDFGLTHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSMSQVRQRIEELRRSSMKEGTQDQIQQPDLINDIDDVSSR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02933 680 ProSiteProfiles Protein kinase domain profile. 383 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02933 680 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Pumo6g02933 680 SUPERFAMILY Protein kinase-like (PK-like) 387 649 IPR011009 -
Pumo6g02933 680 PANTHER OS05G0588300 PROTEIN 10 656 - -
Pumo6g02933 680 FunFam Probable inactive receptor kinase RLK902 27 185 - -
Pumo6g02933 680 Gene3D Phosphorylase Kinase; domain 1 362 457 - -
Pumo6g02933 680 SUPERFAMILY L domain-like 48 208 - -
Pumo6g02933 680 CDD STKc_IRAK 389 652 - -
Pumo6g02933 680 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Pumo6g02933 680 MobiDBLite consensus disorder prediction 653 680 - -
Pumo6g02933 680 MobiDBLite consensus disorder prediction 659 680 - -
Pumo6g02933 680 FunFam Probable inactive receptor kinase At1g48480 458 660 - -
Pumo6g02933 680 Gene3D Ribonuclease Inhibitor 184 232 IPR032675 -
Pumo6g02933 680 Gene3D Transferase(Phosphotransferase) domain 1 458 677 - -
Pumo6g02933 680 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Pumo6g02933 680 Pfam Protein kinase domain 386 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02933 680 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Pumo6g02933 680 FunFam pollen receptor-like kinase 1 357 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02933 Pumo-Chr6 69668348 69671612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02933 26 669 Receptor kinase-like Gene Family AT1G48480 59.077 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo6g02933 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02933 - - gmx:100781597 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02933 6 69668348 69671612 Pumo6g02933 6 69668348 69671612 PCT