Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02932 ATGCCATTGATTTACACTACTCCACCGCTTCACTATGCCATTTCCACCCTCACCACACTCACCAATTCACCATCATCTTCCACTCTCTCTGATGCCGCATTCGGTTCCAATCTTCTGCGCAAAATCCAGAACCCAATTTTTAGGTTTTCCACCACCAGGAATCGCTCGCGTGCTGCAGTAATCAGAGCCAAAGCTGGGACCGATTACTATTCCACGTTGAACGTTAGCCCCAATGCCACGCTGCAAGAAATCAAGGCCTCCTATCGCAAAATGGCGCGAAAGTACCATCCAGACATGAACAAAAGCCCTGGGGCTGAGGATAAGTTCAAGGAAATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGGTCAACTAGTGCTCCAGGGGTTGATCCTTTTGATTTATTCGATACATTCTTTGGTCGTTCTGATGGAATATTTGGAGATGGTGATGAAGGGAGCTTCAACTTCAATTTTAGAAACAAGAGAAACCGTGGTCATGATATTCGATATGACCTTCATTTGAGCTTTGAAGAATCAATATTTGGAGGACAGAGGGAGATTGAAGTTTCCTGTTTTCAGACATGTAATACATGTGATGGTACAGGAGCTAAATCAAAGAATTGCATTAAACAATGCACAAATTGTGGTGGCAGAGGGGGAGAAATGAAAACTCAGAGAACACCCTTTGGAATGATGTCTCAGGTTTCTACCTGCTCTAATTGTGGTGGCCTTGGCAAAATAATCACCGATCACTGTCGAAGGTGTGATGGCAGTGGTCAGGTGCAATCTAAACAAACAATGGAAGTGGAAATTCCTCCTGGAGTCAATGACGGAGACACAATGCAAATTCAAGGACAAGGGAATTTTGATAAAAAGAGGCAAATTACTGGGGATCTTTATGTTGTCCTGCATGTAGATGAAAAGCAGGGAATTCGGAGAGAGGGTCTTCATTTGTACTCGAAGATTAGCATTGACTTCACAGATGCAATATTGGGGTCAGTTAAAAAGGTAGAAACTGTTGAAGGTTTACGGGATCTTCAAATTCCTTCAGGGATTCAACCTGGAGATTCAGTGAAGTTGTCGCGTTTGGGAGTTCCAGACATAAATAAACCATCTGTTCGAGGCGATCATTATTTCATTGTGAATGTTCTTATTCCCAAGGATATCAGTGGCACCGAACGTGTACTTGTTGAGCAGTTAGCTTCACTAAGAGCATCTAGCAAAAGGGGTTCACTGTCTTCTAATGACAATGGGATACCTAAAGGAAAATTCAATGAATTTATAAAGAGGGATCCAAAAGGTGATGCCTCAAGCAAGGGAATAAAAAATGTTTGTTCTCTATGGGGATCAATCAAGAACTTCTTAAGGGGAGGACAGTCTGAAGAAAGGTTTGCCTCAATCAGCATGGATACGACAGCATTATTATGGAGATCTGGCCACCAAAATCCTGTCCCTGATTACTTTTTTGTTGTTTTCATTCTAACTTGGATTTTTGCCTCTATAGCAAAGTCCTAA 1575 0.421 MPLIYTTPPLHYAISTLTTLTNSPSSSTLSDAAFGSNLLRKIQNPIFRFSTTRNRSRAAVIRAKAGTDYYSTLNVSPNATLQEIKASYRKMARKYHPDMNKSPGAEDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGSTSAPGVDPFDLFDTFFGRSDGIFGDGDEGSFNFNFRNKRNRGHDIRYDLHLSFEESIFGGQREIEVSCFQTCNTCDGTGAKSKNCIKQCTNCGGRGGEMKTQRTPFGMMSQVSTCSNCGGLGKIITDHCRRCDGSGQVQSKQTMEVEIPPGVNDGDTMQIQGQGNFDKKRQITGDLYVVLHVDEKQGIRREGLHLYSKISIDFTDAILGSVKKVETVEGLRDLQIPSGIQPGDSVKLSRLGVPDINKPSVRGDHYFIVNVLIPKDISGTERVLVEQLASLRASSKRGSLSSNDNGIPKGKFNEFIKRDPKGDASSKGIKNVCSLWGSIKNFLRGGQSEERFASISMDTTALLWRSGHQNPVPDYFFVVFILTWIFASIAKS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02932 524 Gene3D - 331 423 - -
Pumo6g02932 524 Gene3D - 185 321 - -
Pumo6g02932 524 FunFam Chaperone protein dnaJ A6 chloroplastic 65 171 - -
Pumo6g02932 524 Pfam DnaJ domain 68 129 IPR001623 -
Pumo6g02932 524 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Pumo6g02932 524 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 427 - -
Pumo6g02932 524 SUPERFAMILY Chaperone J-domain 65 169 IPR036869 -
Pumo6g02932 524 CDD DnaJ_C 187 409 - -
Pumo6g02932 524 Gene3D - 215 279 - -
Pumo6g02932 524 CDD DnaJ 68 121 IPR001623 -
Pumo6g02932 524 SMART dnaj_3 67 124 IPR001623 -
Pumo6g02932 524 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 325 IPR008971 GO:0006457|GO:0051082
Pumo6g02932 524 FunFam Molecular chaperone Hsp40/DnaJ family protein 331 423 - -
Pumo6g02932 524 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Pumo6g02932 524 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 202 282 IPR036410 -
Pumo6g02932 524 FunFam Molecular chaperone DnaJ 207 284 - -
Pumo6g02932 524 Hamap Chaperone protein DnaJ [dnaJ]. 65 464 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pumo6g02932 524 Pfam DnaJ central domain 215 279 IPR001305 GO:0031072|GO:0051082
Pumo6g02932 524 Gene3D DnaJ domain 65 168 IPR036869 -
Pumo6g02932 524 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 413 IPR008971 GO:0006457|GO:0051082
Pumo6g02932 524 ProSiteProfiles Zinc finger CR-type profile. 202 284 IPR001305 GO:0031072|GO:0051082
Pumo6g02932 524 Pfam DnaJ C terminal domain 188 406 IPR002939 -
Pumo6g02932 524 PRINTS DnaJ domain signature 70 88 IPR001623 -
Pumo6g02932 524 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pumo6g02932 524 PRINTS DnaJ domain signature 104 124 IPR001623 -
Pumo6g02932 524 PRINTS DnaJ domain signature 124 143 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02932 Pumo-Chr6 69655112 69661154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02932 69 129 C2H2 Transcription Factor Family AT1G74250 40.299 7.25e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02932 K03686 - gmx:100782135 973.77