Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02930 ATGTGTTGCAGAAACCGCTGCATCGCCTGCACCTGCTGCACAATCTTCACCCTCATATCCATTCTCATACTTTCCGTGTTCATCTTTTGGATAGTCGTCTCCCCATCAAATGTCAAGTTCCGTGTAACCGATGCTTCCCTCACACAATTCAACCTCACAAGCAACAACACCTTGTATTACAACTTGAAGGTCAACGTCACAGTGAGAAACCCCAACGACAACATCGTAGTGTACTATAGGAGGATCAAAGCAATAGCTTGGTACAAAGACAATGATTTTGGTTGGGTGAGCTTGACACCCTTTGACCAAGGCCACAAGAACACCACCTTCCTTCAAGCAGTGTTTCAAGGGCATAGTGTGATCAAGCTCAAACCTAAACAACTTGGCGAGTATAAAGACGAGACAAGTGTTGGGATTTACGAGGACTTGGCTGTGGATTTTGATCTTACAATCAGAGCCAAGTTTGGAAGGTTCAAGAGTAATCGTTTCAATCCACCCGTTGTTCAGTGTCGCCGCTTGAAGGTTCCTTTGGTTTCTAATGGTAAATTGGCACCTCCTTTTGGTGTTAGCAAATGCAGAATTGGTCGTTCTTTCTTTGTAGATCGTGATGCTGACACAGGAGCGTGA 627 0.4482 MCCRNRCIACTCCTIFTLISILILSVFIFWIVVSPSNVKFRVTDASLTQFNLTSNNTLYYNLKVNVTVRNPNDNIVVYYRRIKAIAWYKDNDFGWVSLTPFDQGHKNTTFLQAVFQGHSVIKLKPKQLGEYKDETSVGIYEDLAVDFDLTIRAKFGRFKSNRFNPPVVQCRRLKVPLVSNGKLAPPFGVSKCRIGRSFFVDRDADTGA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02930 208 PANTHER OS05G0367900 PROTEIN 8 177 IPR044839 GO:0098542
Pumo6g02930 208 Pfam Late embryogenesis abundant protein 65 164 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02930 Pumo-Chr6 69620167 69620793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02930 32 178 SNARE and Associated Proteins AT1G32270 35.135 2.40e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02930 - - gmx:100783747 325.865