Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02929 ATGTGTTTCAGACCCCGCTGCAGCTTTTGCTACATCTTCTTCACAATCTACACCCTTATGCTCATGTTCATTCTTTCCATCATCCTCTTCTGGATAATCATCTCCCCCTCAAGTGTCAAGTTTCATGTAACTGATGCCTCCCTAACACAATTCAACCTCACAAACAACAACACCTTGTACTACAACTTCAAGGTCAATGTCACAGTGAGAAACCCCAACAACAACATCATAGTGTACTATAGGAGGATCACAGCAATTTCTTGGTACAAAGATAATGCTTTTGGTTGGGTGAGCTTAACACCCTTTGACCAAGGGCACAAGAACACAACCTTCCTTCAAGCAGTGTTTGAAGGGCAGAGGGTGATTAGGCTCAAATCTAAACAACTTGGTGAGTATAAAGATGAGACAAGTGTTGGGATTTACAAGGACTTGGCTGTGGATTTTGATCTTAGAATCAGAGCCAAGTATGCAAGGTTCAAGAGTAGTCGTTTCAATCCACCTGTTGTTCAGTGTCGCCGCTTGAGGGTTCCTTTGATTTCTAATGGTAAATCAGCACCTCCTTTTAGTGTCACCAGTTGCAGTTCTGGTAATTTCTTCTCGGATCGTGATGCTGCTGATGCATAG 624 0.4279 MCFRPRCSFCYIFFTIYTLMLMFILSIILFWIIISPSSVKFHVTDASLTQFNLTNNNTLYYNFKVNVTVRNPNNNIIVYYRRITAISWYKDNAFGWVSLTPFDQGHKNTTFLQAVFEGQRVIRLKSKQLGEYKDETSVGIYKDLAVDFDLRIRAKYARFKSSRFNPPVVQCRRLRVPLISNGKSAPPFSVTSCSSGNFFSDRDAADA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02929 207 PANTHER OS05G0367900 PROTEIN 6 182 IPR044839 GO:0098542
Pumo6g02929 207 Pfam Late embryogenesis abundant protein 66 163 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02929 Pumo-Chr6 69606617 69607684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02929 33 178 SNARE and Associated Proteins AT1G32270 33.333 1.48e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02929 - - gmx:100784278 372.089