Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02917 ATGCAAGGGTCATTCGCTTCCCTTACTTCCAAAAGTGGGAGCATCTCAATCTCACTGACCTCATCATCTTCATCCACCACCATATATACTAGCACCACTTCAATATCTGGCATATCAAAGGTTCACTTCTCCTGCTCAAAAATAGATATGGAATCTGAGAGTCCTAACACTATTGAGACCTACAAACAACAACAAGAGCTAGAAGAAGAAGAAGAGAACAATGAGATCCTCAAGAGAAGAATCTCCAACCACCCTCTCTATGGACTTCTGGTTGAAGCTCACTTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGAGAGAGAGCTGAAGATAGATCAGATGCAAGCAAGGGAGAAGCAAAACTTGGGCATGTTCAGCCAGTCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTGGCAAGCTTAAAGAAGCAATGGTGGAACCACAACAGAAGTCAATGGCCTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACTAACGCAACCTTGCCTGCACCAGCTGAACAAGCTGCAGCTACTACATCTTCTAGTGAGTGCAAATTCAGAAGAAAGCCCACAATTTAG 600 0.435 MQGSFASLTSKSGSISISLTSSSSSTTIYTSTTSISGISKVHFSCSKIDMESESPNTIETYKQQQELEEEEENNEILKRRISNHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQAREKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLRELTNATLPAPAEQAAATTSSSECKFRRKPTI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02917 199 Pfam KNOX1 domain 77 101 IPR005540 GO:0003677|GO:0005634
Pumo6g02917 199 Coils Coil 103 123 - -
Pumo6g02917 199 SMART KNOX2_2 121 172 IPR005541 GO:0003677|GO:0005634
Pumo6g02917 199 SMART KNOX1_2 75 121 IPR005540 GO:0003677|GO:0005634
Pumo6g02917 199 Pfam KNOX2 domain 129 171 IPR005541 GO:0003677|GO:0005634
Pumo6g02917 199 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 52 173 - -
Pumo6g02917 199 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02917 Pumo-Chr6 69458704 69463465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02917 75 167 Homeobox Transcription Factor Family AT4G08150 39.000 9.82e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02917 - - gmx:100790124 256.914