Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02915 ATGGCCTTTGTTCGCCACCGTCGCCACCCTAACCTTCGCCTCCCCATCCCTGAGCCCTTCAAGCGCTGGCCCCGCTTCCCCCTCCCCCTAGCCCCCCCCACCACCACCACCACCACCACCAATCCCACCATCGAGGAAACCATCGCCATTGATGACCTCGAGAAGCTTGTTGTCCTCGGCCATGGCAATGGTGGCACCGTCTACAAGGTCTGCCACAAAGCCACCTCCACCATCTACGCGTTGAAGATCATCCATGGAGACATTGATGCTACCACACACCATCGTGCCCTCTTGGAAGCCTCAATCCTCCGTCGTGCCACTGATTGCCCCCACGTGGTTCGCTTCCATGGCTCTTTTGAGAAGCCCACCGGCGATGTGGGGATCCTCATGGAGTACATGGACGGTGGCTCCCTCGAGACTGCCCTTGCCACCAGCGGCACGTTCTCCGAAGAACGACTTGTCGCGGTGGCGCGTGACGTCCTCGGTGGCCTCGCATACCTCCATGCACACAACATCGTGCATCGCGACATCAAGCCCGCGAACATCCTGATAAACACCCAAGGGGAGGTTAAGATTACTGACTTCGGAGTCAGCAAAGTCATGTGTCGCACACTTGAAATGTGTAATTCTTATGTCGGCACGTGTGCATACATGAGTCCCGAACGATTCAACCCAGATGCATATGGTGGGAAATATAACGGTTTTGCTGCCGATGTATGGAGTTTGGGTTTGACACTTTTTGAACTTTACGTGGGTCACTTCCCATTTCTTCAAGTGGGTCAGAGACCTGATTGGGCCACCCTTATGTGTGCCATTTGCCTTGACGAACCACCAAGCCTCCCAAAGACTGCGTCACCAGAGTTTCGTAACTTTGTGGAGTGTTGCCTGAGGAAGGAGTCTAGCGAGAGGTGGACAACGAGTCAGCTTTTGACCCATCCATTTGTTTGCAAAGACCCAGAAACCTGTTAA 969 0.5459 MAFVRHRRHPNLRLPIPEPFKRWPRFPLPLAPPTTTTTTTNPTIEETIAIDDLEKLVVLGHGNGGTVYKVCHKATSTIYALKIIHGDIDATTHHRALLEASILRRATDCPHVVRFHGSFEKPTGDVGILMEYMDGGSLETALATSGTFSEERLVAVARDVLGGLAYLHAHNIVHRDIKPANILINTQGEVKITDFGVSKVMCRTLEMCNSYVGTCAYMSPERFNPDAYGGKYNGFAADVWSLGLTLFELYVGHFPFLQVGQRPDWATLMCAICLDEPPSLPKTASPEFRNFVECCLRKESSERWTTSQLLTHPFVCKDPETC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02915 322 CDD PKc_MAPKK_plant_like 51 315 - -
Pumo6g02915 322 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 47 315 - -
Pumo6g02915 322 Gene3D Transferase(Phosphotransferase) domain 1 130 321 - -
Pumo6g02915 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Pumo6g02915 322 ProSiteProfiles Protein kinase domain profile. 53 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02915 322 FunFam Mitogen-activated protein kinase 2 135 321 - -
Pumo6g02915 322 Gene3D Phosphorylase Kinase; domain 1 33 129 - -
Pumo6g02915 322 SUPERFAMILY Protein kinase-like (PK-like) 49 317 IPR011009 -
Pumo6g02915 322 FunFam Dual specificity mitogen-activated protein kinase kinase 36 133 - -
Pumo6g02915 322 SMART serkin_6 53 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02915 322 Pfam Protein kinase domain 54 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02915 322 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02915 Pumo-Chr6 69441480 69442448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02915 1 315 MAP Kinase Kinase Gene Family AT1G18350 55.696 5.43e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pumo6g02915 Pkinase 2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02915 K20604 - gmx:100804100 528.094