Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02914 ATGGCCCTCGTCCGCCACCGCCGCCACCCCAACCTCCGCCTCCCCCTCCCGGAGCCCTCCGAGCGCCGCCCCCGTTTCCCCCTCCCCCTCCCCCTCCCTCCCGCCACCGCCAAACCCTCCCCCGGCGACGCCATCGCCGCCGCCGACCTCGAGAAGCTCGCCGTCCTCGGCCACGGCAACGGCGGCACCGTCTACAAGGTCCGCCACAAGGCCACCTCCGCCACCTACGCGCTCAAGATCATCCACGGCGACGCCGACGCAACCACGCGCCGCCGCGCCCTCTCGGAAACCTCCATCCTCCGCCGCGCCACCGACTGCCCCCACGTCGTCCGCTTCCACGGCTCCTTCGAGAAGCCCTCCGGCGACGTGGCCATCCTCATGGAGTACATGGACGGCGGCACCCTCGAGACCGCCCTCGCCGCCGGCGGCACGTTCTCCGAGGAGCGACTCGCCAAGGTGGCGCGTGACGTCCTCAGCGGCCTCGCGTACCTCCACGCGCGCAAAATCGCGCACCGCGACATAAAGCCCGCGAACATCCTAGTAAACTCCGAAGGAGAGGTTAAGATTGCAGACTTTGGAGTTAGCAAACTCATGTGCCGCACGCTCGAAGCGTGCAACTCTTATGTCGGCACGTGCGCGTACATGAGTCCCGACCGGTTCGACCCGGAAGCATATGGCGGGAACTATAACGGTTTAGCTGCGGATATATGGAGTTTGGGTTTGACCCTTTTTGAACTCTATGTGGGTCACTTTCCGTTTCTTCAAGCGGGTCAGCGACCCGATTGGGCTACCCTTATGTGTGCCATATGCTTTGGCGACCCGCCGAGCCTCCCCGAGTCGGCGTCACCGGAGTTTTGCGATTTCATCGAGTGCTGCCTCAAGAAGGAGTCCGGGGAGAGGTGGACGGCGGCTCAGCTCTTGACCCACCCGTTTGTGTGCAAAGACCCGGAAACCTGTTAA 960 0.6458 MALVRHRRHPNLRLPLPEPSERRPRFPLPLPLPPATAKPSPGDAIAAADLEKLAVLGHGNGGTVYKVRHKATSATYALKIIHGDADATTRRRALSETSILRRATDCPHVVRFHGSFEKPSGDVAILMEYMDGGTLETALAAGGTFSEERLAKVARDVLSGLAYLHARKIAHRDIKPANILVNSEGEVKIADFGVSKLMCRTLEACNSYVGTCAYMSPDRFDPEAYGGNYNGLAADIWSLGLTLFELYVGHFPFLQAGQRPDWATLMCAICFGDPPSLPESASPEFCDFIECCLKKESGERWTAAQLLTHPFVCKDPETC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02914 319 FunFam Mitogen-activated protein kinase 2 132 318 - -
Pumo6g02914 319 Gene3D Phosphorylase Kinase; domain 1 42 125 - -
Pumo6g02914 319 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Pumo6g02914 319 CDD PKc_MAPKK_plant_like 48 312 - -
Pumo6g02914 319 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 46 314 - -
Pumo6g02914 319 ProSiteProfiles Protein kinase domain profile. 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02914 319 Gene3D Transferase(Phosphotransferase) domain 1 126 318 - -
Pumo6g02914 319 MobiDBLite consensus disorder prediction 1 41 - -
Pumo6g02914 319 MobiDBLite consensus disorder prediction 21 38 - -
Pumo6g02914 319 Pfam Protein kinase domain 51 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02914 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pumo6g02914 319 SMART serkin_6 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02914 319 FunFam Dual specificity mitogen-activated protein kinase kinase 37 130 - -
Pumo6g02914 319 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02914 Pumo-Chr6 69432229 69433642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02914 1 315 MAP Kinase Kinase Gene Family AT1G73500 60.443 6.25e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pumo6g02914 Pkinase 3.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02914 K20604 - gmx:100804100 555.058