Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02911 ATGATAGGGAGAGTGTGGAGAAGGTGGTTTGATGAAGGGAACATCACATGTCCGGTCACCAACCAGGTTGTGAGGAACTTTGACATGATTCCAAACCATTCCCTCAGGATAATGATTCAAGATTGGTGTGTGGAGAATAGGCAACATGGGGTGGAGAGGATTCCAACACCAAGGATACCAATTAGCCCAATTGAGGTTGCTGAGCTTCTGATGCAAGTGAAGGCCTCAGCAAGGGGTTTGGACCAATATGGCTGCCTTGAATTGGTTCAGAAATTGAAGAGGTGGGGTGGTGAGAGTGAGAGGAACAAGAGGTGCATAGTGGACAATGGAGCACCTGTGGCATTGGCCTCATCTTTTGATGCATTTGCAAATGATTCCATTGAGAGGAATGTGGCGGTTCTTGAGGAGATTCTGTCAGCACTCAATTGGATGTTTCCACTTCAATTGGAGGCACACAAGTCTTTGGGGTCTTTGGCTTCTCTACGTTGCATGGTTTGGTTCTTGAAGCACCAAGATCTCTCACGGAAAGAGAAGTCCATTGTGGCATTGAAGAGCTTCTCTCCTTTGGTGATGTGCAGCATGTGGAGGCCTTGTCACAAATTGAAGGGGTCAATGAGCTCTTGGTGGAGTTCATCAACAAGAGGATTAGTCCAACCATCACAAAGGCCTCATTGA 675 0.4696 MIGRVWRRWFDEGNITCPVTNQVVRNFDMIPNHSLRIMIQDWCVENRQHGVERIPTPRIPISPIEVAELLMQVKASARGLDQYGCLELVQKLKRWGGESERNKRCIVDNGAPVALASSFDAFANDSIERNVAVLEEILSALNWMFPLQLEAHKSLGSLASLRCMVWFLKHQDLSRKEKSIVALKSFSPLVMCSMWRPCHKLKGSMSSWWSSSTRGLVQPSQRPH 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02911 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 49 IPR013083 -
Pumo6g02911 224 PANTHER WDSAM1 PROTEIN 8 186 IPR045185 GO:0061630
Pumo6g02911 224 ProSiteProfiles U-box domain profile. 1 49 IPR003613 GO:0004842|GO:0016567
Pumo6g02911 224 SUPERFAMILY RING/U-box 6 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02911 Pumo-Chr6 69379704 69381608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02911 9 189 U-box Gene Family AT5G37490 41.989 2.97e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02911 - - gmx:100794340 345.895