Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02904 ATGAAGTTCTTAGAATCTTTGGGTGTTGACAAGAAGCAATGGCCAAAGGTGATCTATCGCTTCCCGGCCCTGCTAACTTATAGCAGGCAGAAAGTGATGGAAAGCATAGATTTTCTCCAAGAATTGGGCCTCTCAGAAGAGAGTATAGGTAAGATTTTAACTCGTTGCCCTAATATCGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACGGCTATGTACTTCCGTTCTTTGGGGGTTGATGTTGGGATTCTTCTATTCAGATGCCCACAGAATTTTGGTCTTAGCATTGAGGCCAACCTAAAGCCTGTAACAGCATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTTTATACTTTCAGCTTGACTGAAAATCTGATTCCAAAATGGGATTTCTTTTTGACCACAGGTTACCCAAAATCTGATCTGGTTAAGTTCCTTCAATATTTTGGATACAGTTTAGAGGAAAGGATTAAACCTAGATTTGCAATTATGAAAAAATCTGGAGTGAAGTTACTGCTGAATCAGGTTCGTTCACTGTCAAGCAGCAACTTTGATGAGGCCTTCAAAAAGAAAATGAAGAAAATGCAAGATGGTTAG 633 0.4013 MKFLESLGVDKKQWPKVIYRFPALLTYSRQKVMESIDFLQELGLSEESIGKILTRCPNIVSYSVEDNLRPTAMYFRSLGVDVGILLFRCPQNFGLSIEANLKPVTAFFLERGYTLEEIGTMISRYGAFYTFSLTENLIPKWDFFLTTGYPKSDLVKFLQYFGYSLEERIKPRFAIMKKSGVKLLLNQVRSLSSSNFDEAFKKKMKKMQDG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02904 210 Gene3D Transcription termination factor 3, mitochondrial 1 207 IPR038538 -
Pumo6g02904 210 SMART mt_12 50 81 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 SMART mt_12 83 114 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 SMART mt_12 15 45 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 Pfam mTERF 87 195 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 Pfam mTERF 2 110 IPR003690 GO:0003690|GO:0006355
Pumo6g02904 210 PANTHER CGI-12 PROTEIN-RELATED 2 201 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02904 Pumo-Chr6 69223061 69223693 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo6g02904 mTERF 9.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02904 K15032 - gmx:100781900 382.874