Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02893 ATGGATGGTGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCTACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCGTCCATGCCGGAAAAACCTTTAATTGGAGGGCGCAATGCTGCAGTTTTATCTGGCACTAATGGGGCATTTCACCATAGGGACATTGGTGGTATGCCCCAAGCTACATACCCTATGGAATACATGAGGGATGCGTGGATTAGTCAGAGAGACAAATATATGAATATGATACCTACAAACCATAATTATGGTGGTATTCCAGAGACATCTTCAGCACATCAAATTCAAATGATTCAAGCACCAGAATTGCCGAAGGAAGAAAAGCCAGTGGAAGAAGCGCCTGTTGTCGAGAAGGCAAACGGAGCTCGTAAGAAAAGACAGGGGCCCAAGGTTCCCAAATCTCCCAAGGCTAAGAAGCCAAAGAGGGGGCCTCGCACGCCAAAGGATGAGAATGCTCCTGCAGTTCAACGTGCTAGGGTTCCGAAGAAAACTACTGAAATTGTAATAAATGGGATTGATATGGATATTTCTAGCATTCCGATTCCGGTTTGTTCATGCACCGGGACACCTCAACAGTGTTATAGATGGGGCTCTGGTGGTTGGCAGTCTGCATGTTGCACAACAGGCATGTCAGTATATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAATTTGTCACTATCAGGTAG 849 0.4523 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGGMPQATYPMEYMRDAWISQRDKYMNMIPTNHNYGGIPETSSAHQIQMIQAPELPKEEKPVEEAPVVEKANGARKKRQGPKVPKSPKAKKPKRGPRTPKDENAPAVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02893 282 MobiDBLite consensus disorder prediction 135 152 - -
Pumo6g02893 282 MobiDBLite consensus disorder prediction 114 134 - -
Pumo6g02893 282 SMART GAGA_bind_2 1 282 IPR010409 -
Pumo6g02893 282 MobiDBLite consensus disorder prediction 112 170 - -
Pumo6g02893 282 PANTHER - 1 282 IPR010409 -
Pumo6g02893 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02893 Pumo-Chr6 69089073 69089921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02893 1 282 BBR or BPC Transcription factor family AT2G01930 51.515 1.33e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pumo6g02893 GAGA_bind 4.2e-113 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02893 - - gmx:606296 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02893 6 69089073 69089921 Pumo6g02893 6 69089073 69089921 ECH