Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02878 ATGCCAGATCTTGATGGCAATTGGCAATTGGGTGGCCTTGGATCGGTGATTGGGGAAATCTCGAGAAGCTTTGGTGTTTGCGGTTTTCTTTGGGACCGTCTCCTAGGTTTCGTTGTTTTCAAGGAACATAAAAAGTTGTCAAATTTCTTGGCTTTGGTTGCTGAAGATTTTTTGTTCCGGAAGAAACAAGCATTTATTCTTCTGGGTATAATAGAAACACAAAGGTGGCATAATGCCACCACTTGGTTATGCCTGAACGAGGTTGGCAAGGGCTTGAGAATGGCAGATACAAATTCAGTTGAAGTGATTTTGGATTTTCTGAAGAGGAATCGGTTCACGCGAGCTGAGGCGGCTTTGCGTAGTGAGCTCAGTAACTGTTCTGATGTGAATGGTTTCTTGCAGAAACTTACATTGGATGAAAAGGACTTGCGTGGTGGGTTGCAGAATGATAAGGGGAAGCCTGTGGTAGAAAATCAAGGGTTGGATTCTCGTGACGGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGAACTGGTAGAAATGCTGCTGAAAGCAAATGGAAAACTGTTGCTCCTACTGGCGAAAGGAATAAGTCTAATGAAGTGGTTGGGACGAGTGACAAAAACTTCACTTTCTCCAAGAGTTCGGAGGACAGTGTTCTTGATCTGTACTCATGGAAGTTTAATGCCAGCAATGGTCCTGTGGAGCCTTACCCAAATGATGGTGGAAGTAGGCCTAATAATGCTTTAAAGGCCCCGGTATCTCAGCAATCAAAGTATCAAACTAGTGAAGCTCTTGATGCAACCAACAGTAATGTGAAATCTAGGGAGGAAAATAATGTGCCTGCTGAAAAAACATCCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTATGGAACCAAAGTACAACCTTATGCAGAGCAAAGAACCTAGGGAACTTGATCTGCAGCTTAAATTTAATGCTTCATCTCTTAAAGAGAACTTGACAGATAATGTCTTGTCAAGAACTGATGAGAATGTGAATTCATCTACAAACCTATGGAAAGATTGTTCTGTCAAAACTGTTTTCCCTTTCTCAAAGGGGGATATGTCTACAAGCTACAACGGTTCAACTTATTCTGACAGAAAAGAGGAAACGAGAAGGGCAGAAAACAGTGATGTTACGGCATCAATAAAAGAGCAAGTGGATGAAGTGGGAAGAGCTCTTTACTTAGGAAAGTTGCAAGGCAGTTCTGGCAGCTTGAATTTTCCTCTTGCACTGGAAAATCAGAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATCAAGTCAGAAGATAAGCCCTTGACTTTTAATTGGGGGGAGAAGTTTGAGGGTGATGGACTTGCTGTGAAACTCGCTGGTGCTGACAACACCTTACTTATCGGGTCATATTTGGATGTCCCTATTGGACAAGAAATTAAAACTACAGGTGTGAGGAAGGCTATAGGGGGCAGTTGGCTGTCTGTAAGTCAAGGGATTGCTGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAATTGGCGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGACGACGACGAAGATGTTGGATACACGAGACAACCTATTGAGGATGAGGCCTGGTTTCTGGCACATGAAATAGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGTTCCAGCCAAAGATGAGGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGTGAGCAATATATTGTAGCAAAAAATGTTGAGCCGGTCACTGCTTCAGATGATCCTATTGGTCTAACGATTACTGAAATGTATGGAAGAACTAATGGTAATGATTTAATGGCTCAATATGATAGACAATTGATGGATGTTGAAGAACTGAATCTGATGCATATGGAACCTGTCAGGCAGGGCTTTGTCACTCACAAAAATGATCTCATCATGCTGGGAGATGGGAAGGTTCTGAATCATAGTGCGAGGTCACGAATTGAGGACATGGAAGATGATCAACATGGTTCAGTTAGATCAATTGGGGTGGGGATCAACAGTGATGCTGCTGATATTGGCAGTGAAGTGCATGGAAGTTTGGTTGGTGGTAGTAGTGAGGGGGATTTAGATTATTTCCGTGATCATGATACTACGCACAGTGGTTCCAGACACTCTCATCATGATTTGGATAAGAATTCTATTAACAAATCGTTCAAAAATAATAAGAAAAATGACAAGACTGAGTCAAATAAATATGTCATTGACAGTGATAAAGATGCATTCTCGCAGATAAAAACACATACTGATGGGAACTTCTCATTTCCCCAATCTCTTAGAGATGGCCAGATGATTCAGGCTGGCTCCAGTAAGCCCCTATGGTCGAGTAATTGTAATGTAGATGAAACAGATGACTGTATTAATGCATTTGTGGGATCTGATGACATGCTTTCTTCTTGGAGGCGGAAGAGTAGTGATTCTTCGCCCGTTAAAAGTTCTAGGGATGAGAATAATGCTATTGTGGTTAGATCCAGAAACTCTTCTCCAACTACAGTCTCGAATTATGGGTATACTGATGGAGAGCATGTCAAGCTAGAAAAGGATGAAAAGTTTAGCATTGTAAGGGAAGATGATCTAGGTGCATCACTAGAGGATGAAGAGGCAGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCCGTAATAGCTGGGCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAATAAAGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTTCAGACAAGTACCACCTTCTAAGATTGTATGATTACTTCTATTATAGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCACAAATTTAATCGAGAATCAGGGGGGGAAGTGTATTTCACGATGCCAAGGTTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTAAGTTTTTGCACAGTCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTCGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAGATTGATATCTGGTCACTCGGATGCATCTTGGCAGAACTGTGTACTGGCAATGTCCTCTTCCAAAATGATTCCCCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGCCCAATTGATCAAAGTTTACTTGCTAAAGGACGGGATACATATAAGTACTTCACAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCGAAAAAGACATCAATGAGGCATAGATTACCGATGGGGGACCAAGGCTTCATCGACTTTGTTGCTCATTTGCTTGAGGTTAACCCGAAGAAGCGGCCTTCTGCATCTGAGGCGCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTGA 3816 0.4151 MPDLDGNWQLGGLGSVIGEISRSFGVCGFLWDRLLGFVVFKEHKKLSNFLALVAEDFLFRKKQAFILLGIIETQRWHNATTWLCLNEVGKGLRMADTNSVEVILDFLKRNRFTRAEAALRSELSNCSDVNGFLQKLTLDEKDLRGGLQNDKGKPVVENQGLDSRDGVEVSKELIVKEIECGTGRNAAESKWKTVAPTGERNKSNEVVGTSDKNFTFSKSSEDSVLDLYSWKFNASNGPVEPYPNDGGSRPNNALKAPVSQQSKYQTSEALDATNSNVKSREENNVPAEKTSLWLGSSGKASMEPKYNLMQSKEPRELDLQLKFNASSLKENLTDNVLSRTDENVNSSTNLWKDCSVKTVFPFSKGDMSTSYNGSTYSDRKEETRRAENSDVTASIKEQVDEVGRALYLGKLQGSSGSLNFPLALENQKEEFPRLPPVKIKSEDKPLTFNWGEKFEGDGLAVKLAGADNTLLIGSYLDVPIGQEIKTTGVRKAIGGSWLSVSQGIAEDTSDLVSGFATIGDGLSESVDYPNEYWDSDEYDDDEDVGYTRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERVPAKDEEDDQSFAEEDSYFSGEQYIVAKNVEPVTASDDPIGLTITEMYGRTNGNDLMAQYDRQLMDVEELNLMHMEPVRQGFVTHKNDLIMLGDGKVLNHSARSRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLVGGSSEGDLDYFRDHDTTHSGSRHSHHDLDKNSINKSFKNNKKNDKTESNKYVIDSDKDAFSQIKTHTDGNFSFPQSLRDGQMIQAGSSKPLWSSNCNVDETDDCINAFVGSDDMLSSWRRKSSDSSPVKSSRDENNAIVVRSRNSSPTTVSNYGYTDGEHVKLEKDEKFSIVREDDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPSDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALKFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSMRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02878 1271 MobiDBLite consensus disorder prediction 371 391 - -
Pumo6g02878 1271 Gene3D Phosphorylase Kinase; domain 1 954 1041 - -
Pumo6g02878 1271 MobiDBLite consensus disorder prediction 567 594 - -
Pumo6g02878 1271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1086 1098 IPR008271 GO:0004672|GO:0006468
Pumo6g02878 1271 CDD PKc_DYRK_like 960 1262 - -
Pumo6g02878 1271 PANTHER DUAL SPECIFICITY PROTEIN KINASE 723 1262 - -
Pumo6g02878 1271 MobiDBLite consensus disorder prediction 253 281 - -
Pumo6g02878 1271 Pfam Protein kinase domain 960 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02878 1271 MobiDBLite consensus disorder prediction 239 286 - -
Pumo6g02878 1271 SUPERFAMILY Protein kinase-like (PK-like) 949 1264 IPR011009 -
Pumo6g02878 1271 MobiDBLite consensus disorder prediction 377 391 - -
Pumo6g02878 1271 FunFam Serine/threonine-protein kinase ppk15 1039 1263 - -
Pumo6g02878 1271 Gene3D Transferase(Phosphotransferase) domain 1 1014 1262 - -
Pumo6g02878 1271 SMART serkin_6 960 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02878 1271 FunFam Putative serine/threonine-protein kinase dyrk2 954 1041 - -
Pumo6g02878 1271 ProSiteProfiles Protein kinase domain profile. 960 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02878 1271 Coils Coil 912 932 - -
Pumo6g02878 1271 MobiDBLite consensus disorder prediction 733 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02878 Pumo-Chr6 68795250 68803774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02878 959 1257 MAP Kinase Gene Family AT5G19010 31.348 9.36e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pumo6g02878 Pkinase 6.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02878 - - gmx:100786225 2209.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01547 4 19370448 19373494 Pumo6g02878 6 68795250 68803774 ECH
Pumo6g02878 6 68795250 68803774 Pumo6g02878 6 68795250 68803774 ECH
Pumo6g02878 6 68795250 68803774 Pumo6g02878 6 68795250 68803774 PCT