Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02867 ATGCAGAATTATCAAGGAAGCATGGCTAATTTTGAAAATGACAAGCTGCCGATGCTGTCAGATACAGATGCACAACCATATGATGAACCCTTGGACTCTAAATTCCGAAGGACAGTAACCAGGACACAAAGCGCATCAATTTCTATTCCTATGAGCTCCTTGGAGTCATATGAGAGAGAAACTAGTCTTGTGGGACATACTGGTCCACTTCAGAGCAAGAGAAAAACACCCTTTATACAGATGAGTGGTCCATTATATGCTACCACTGGAACTGGAAATCTTCTGCAGAAGCATATTGTATCTGGAAACAAAGCAGAGGAGAGAAAGGCAGATAATTTTGCCACTCTCCACAACACAGGTTCAAATTACTGGAATAACGATTATGATAGAAAAAATGAACACTTACTAAGGTCTGGGCAACTGGGAATGTGCAATGATCCTTATTGTACTACTTGCCCTACCTACTTCAATGCTTCTCAGCAAAGAAATCCAAAACCTTCGACTAGATGGGATCCAAAGTTCCATAATGCTCTTTATGGGGATGCCAAGAGCTTTGTGAGAAAACTTCTTTCTTTCTGCTATTCATATGTTCCCGGAGTTATGAACCCTCACGCTAAAGTTGTACAAAAATGGAACAAATTTTTGGCCATTTTTTGCTTGATTTCTATTTTTGTGGACCCATTATTTTTCTTCTTACTGTATGTGGAGAAGGATAATAAATGTATTGTTATCAACTGGCCTTTGACAACAACACTTGTTTTATTTAGATGTGTGAATGATTTTGTTTATTTCCTTAACATTCTTCTCCAGTTTAGGTTAGCTTATGTTTCTCGTGAGTCGAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTCATTACCTAAAGGGTTATTTCCTCATTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTTGTCCTACCAAATGCCTTGGGGGGAGCAAATTTTGCTAAGAATCTTCTGCGTGCAGCAATCTTAGTGCAATATATCCCCAAGTTATTCAGGTTTCTGCCGCTGCTAATTGGGCAATCTCCAACTGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTTGCTAGTCATGTTGTTGGCTCTTGCTGGTACCTCTTCGGCCTTCAGAGGGTTAATCAGTGTTTGCGGGATGCCTGCCATAGTTCTAATATACCTGGATGCATGAAGTTCATTGATTGTGGACGTGGCCATGGAAACAATCAGCCTGACTTAACACCAGATCAGTGGATCAACAATACCGATGCTGTTGCTTGTTTGGATCCCTCTCCTAATGGTTTCTCTTACGGGATTTATGAGAACGCTGTACCACTTACTATAGAAACTAACATGGTCAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCTAGTTCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGGCCATCATAGGAATGGGACTCTTGCTTTTTGCAATTCTTATTGGAAACATACAGAACTTTCTACAGGCTCTTGGACGGAGGAAGCTGGAAATGCAACTTAGAGGCCGTGATGTCGAGCAATGGATGAGCCATCGGCGCTTACCAGAAGATCTAAGAAGGAGAGTCAGACAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTTATGGAGAATTTGCCAGAAGATCTCCAGAGAGACATAAGGCGTCATCTCTTCAAATTTGTCAAGAAAATTCGGATTTTTGCTCTGATGGATGATCCTATCTTAGATGCCATTTGTGAGAGACTAAGACAAAAGACATACATCAAAGGAAGTAGAATTCTGAGTCAGGGTGGTCTGGTAGAGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAAAGCATTGGAGAAGATGGAACTAGAATTCCTCTATCTGAAGGGGATTCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTGTCAGCACAGATGGTAGAAAAGTAAGGCTTCCAGGACAGAGATTGGTTAGCAACAGGACAGTAAGGTGCTTAACAAATGTGGAGTCATTTTCACTCTCTGCTTCAGACCTTGAAGAAGTCACAATCCTTTTCACGAGATTCTTGCGGAGTCCATGCGTTCAAGGAGCTCTAAGGTATGAGTCACCTTATTGGAGATCCCTTGCTGCGAACCGCATTCAAGTTGCCTGGAGATACAGGAAGAAATGTCTAAGTCGAGTTAATTCCTCACCATCAGATTAA 2322 0.41 MQNYQGSMANFENDKLPMLSDTDAQPYDEPLDSKFRRTVTRTQSASISIPMSSLESYERETSLVGHTGPLQSKRKTPFIQMSGPLYATTGTGNLLQKHIVSGNKAEERKADNFATLHNTGSNYWNNDYDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASQQRNPKPSTRWDPKFHNALYGDAKSFVRKLLSFCYSYVPGVMNPHAKVVQKWNKFLAIFCLISIFVDPLFFFLLYVEKDNKCIVINWPLTTTLVLFRCVNDFVYFLNILLQFRLAYVSRESRVVGAGDLVDHPKKIALHYLKGYFLIDLFVVFPLPQIMILFVLPNALGGANFAKNLLRAAILVQYIPKLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGNNQPDLTPDQWINNTDAVACLDPSPNGFSYGIYENAVPLTIETNMVNKYVYSLFWGFQQISTLAGNLVPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRIFALMDDPILDAICERLRQKTYIKGSRILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDLEEVTILFTRFLRSPCVQGALRYESPYWRSLAANRIQVAWRYRKKCLSRVNSSPSD 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02867 773 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 144 762 - -
Pumo6g02867 773 SUPERFAMILY Voltage-gated potassium channels 206 533 - -
Pumo6g02867 773 SMART cnmp_10 605 740 IPR000595 -
Pumo6g02867 773 MobiDBLite consensus disorder prediction 1 20 - -
Pumo6g02867 773 Gene3D Jelly Rolls 603 727 IPR014710 -
Pumo6g02867 773 SUPERFAMILY cAMP-binding domain-like 533 725 IPR018490 -
Pumo6g02867 773 CDD CAP_ED 605 721 IPR000595 -
Pumo6g02867 773 Gene3D - 212 530 - -
Pumo6g02867 773 ProSiteProfiles cAMP/cGMP binding motif profile. 605 673 IPR000595 -
Pumo6g02867 773 Pfam Ion transport protein 211 532 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo6g02867 773 Gene3D Helix hairpin bin 532 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02867 Pumo-Chr6 68599133 68608680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02867 12 683 Ion Channels AT3G17700 61.414 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02867 K05391 - gmx:100795427 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02867 6 68599133 68608680 Pumo6g02867 6 68599133 68608680 ECH