Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02812 ATGACTGTGTCAGCATCCTTCAGCTACGATGTGTTCCTCAGCTTCAGAGGCTCTGACACTCGCTACGGTTTTACTGGCAATCTCTACAAAGCTCTAAGTGATCGGGGAATCCACACCTTCATTGATGAAGAGGAGCTTCAAAGAGGGGATGAAATTGGACCGGCACTTATCGAGGCCATTAAACAGTCTAGGATGGGTATCCTTGTGTTCTCTAAGAACTATGCATCTTCTTCGTTTTGCTTAGATGAACTTGTCAAAATCATTGAGTGTGTTAAGGCAGAGGGTCGGTTGGTTTTGCCCCTTTTTTATGACGTCAATCCTTGTCATGTGCGACATCAGTCTGGGAGTTATGGAGAAGCACTGGCTATGCACGAGGAAAGGTTCACAAGTAGCAAGGAAAACCTCAAGGAGAACATGGAGAGGCTGCAGAAATGGAAGATGGCTCTTAACCAAGCAGCTAATTTGGCCGGCAAGCATTACAAACTTGGAAATGAATATGAACATGAGTTTATTGGGAAGATAGTTAAAGAGGTCTCCAACAAGATTAACCGTCCACCTTTACAAGTTGCGGATTACCCTATTGGGCTGGAGTCTCGAGTACAAAAAGTAAAGTTGCTTCCGGAATTTGAATCTGATATTGGAGTCCACATTGTAGGGATTTATGGAATAGGCGGAATGGGGAAAACAACACTTGCTCGAGCAGTTTATAATTCAATTGCAGACCGATTTGAAGGTTTATGTTTTCTTGATGATGTGAGAGAAAATGCTACTAAACACGGATTAGTACATCTCCAAGAGACGCTTCTTTCTGAAATAGTTGGAGAGAAGGATATTAAGATAGGAAGTGTTAGTAAAGGAATTTCAATAATGAAGCATAGGCTCCAGCGAAAGAAGGTTCTTTTAATTCTTGACGATGTTGACAAACTAGAACAATTGCGGGCAACTGTTGGAGGTCCTAATTGGTTTGGTTCTGGCAGTAGAGTCATCATAACTACTCGGGACAAACATTTGCTTGCAAGTCATGGGGTTGATAGAAAATATGAGGTAGAGGATTTAAATGAGGAAGAAGCACTTGAATTGCTTACTTGGAATGCTTTTAAAGATGACAAAGTTGATCCATGTTACAAGGACATTTCAAACCAAGCAGTGGCTTATGCTTCTGGTCTTCCACTAGCTTTGGAAGTAGTAGGTTCCCTATTGTTTGGGAAAGGCATAAAAGAATGGGAATCTGCATTAGATCAGTATAAAAAAATTCCTAATAAAAGGATCCAAGATATACTTAAGGTAAGCTATAATGCTTTAGAGGAAGATCATCAGAAAATTTTTCTCGACATTGCTTGCTGCTGGAAAGGATATGAATTGGCAGAGGTTGAAGATATACTTTGTGCTCATTATGGTATTTGCATGAAATATGGCATAGGAGTGTTGGTTGATAAATCTCTCATAAAAATTAAGAATGGCTGTGTGACACTTCATGAATTGATAGAGGCTATGGGTAAAGAAATTGATCGACAAGAATCACCGAAAGAGCTTGGGAAACACAGGAGGCTATGGTTCCATAAAGATATAATTCAAGTCTTAGCAGAAAATACAGGGACTAGTGAGATTGAAATAATCTGTTTGGATTTCCCCTTATTTGAAGAAGACAAAGAAGTATTTGTAGAATGGGATGGAGAGGCCTTCAAGAAGATGGAAAACCTCAAAGCACTAATTATTAGAAATTCTCATTTTTCAAAAGGTCCCACACATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGACATATCCATTACAGGATTTACCAACTGATTTTCATCCAAACAAACTTGCCATATGCAAATTACCCAGAAGTTGTTTTACATCACTTGAGTTAACTGGCATATCGAAGAAGTTCATGAATCTCACAGTTTTAAATTTTGACGGGACTGAATGTTTAACTCAAATACCTGACATATCCAGTCTCCAAAATTTAGTAAAATTGACATTTGAATGTTGTGAGAATTTAGTTGCAATTCATGATTCTGTCGGTTTTCTTGATAAACTTAAAATCTTGAGTGCTTTTGGTTGCAGCAAGCTTATGAGTTTTCCACCCATCAAGTTGATCTCTCTTGAACAACTTGACCTTTCATCTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATAACACAGCTTGAGTTGAAGTACACTCCTTTAAAAGAATTCCCATTTTCATTCAGAAATCTTGCTCGACTTCGAGATTTAGTGCTGGTTGACTGTGGAAATGTTCAGTTACCAAGTAGCATTGTCATGTTGCCAGAACTGGCTGAGATTTTCGCTCTGGGATGCAAAGGGTGGCTATTGCCAAAACAAGACGAGGATGATGAAAAAGTGAGCTCAATGTCTTCAAATGTAAAATGTCTTTGTCTCTCAGGCTGCAATCTATCAGATGAATATTTTCCCATGGTTTTAGCATGGTTTAGTAATGTGAAAGAGTTAGAGCTATCGAGCAATAACTTCACATTTCTTCCTGAATGCATCAAAGAATGTCGCTCTTTAATATTACTTAATTTGGATAATTGTGAGCATCTTCGAGAAATTAGAGGGATTCCACCAAATTTAGAATATTTCTCTGCGGGAAATTGCAAATCCTTGAGTTTCTGCTGTACAGCCATGTTGTTGAAGCAGGAACTACATGAGACTGGAAACACCATGTTTTGTTTGCCGGGAACAAGGATTCCAGCGTGGTTCGAGCAACAAAGTATAGGTCCATCATTATCCTTCTGGTTTCGTAACAAGTTCCCTGTCATGGACCTCTGTTTTGTTATTGGACCAATGGGTAAGGACTCTATTTTGTTTAGACCCATCTTGACCATCAATGGCAACACAATGGAGATGCAGTTCTTAACTGAAAAGAGGTTTTGTTTCGACTTCCCAGCATTAGATTATCATATACTTACAATTGGTACAAAATACATGAAGTTTGGAGATTATCTGGATAAACCACTCTCAAAAAATGAATGGAATCATGTGGTGGTTTCCATTGGTATTGATTTTGATCCATCCCCTAAGGAAATGATTGTCAGGCAAACTGGACTCCACGTAATCAAACCAGAAAGTAGCATGGATGATATCCAATTCAGCGATCCTTATAACCAACCATCCTTGAAAGAGAAACAAAGATTGGTGGACATAGCTGGTTGTCCTAGACAATTCATGCAGCAGCAAACCACTTTTGCTTCATTGAAACTACATGTGAGACAGGGCAGAGAGTCATTTTCATTGCTTCCACCTCAAGCATGCAAAAATAATATGAATTGGGATTCAAATTCAAGTGGAATAAGTAGCACTGCCAGTGTCCAGGGTTATGAATTTGCATCACAAAATTTACGGTTGGACATGGGAGTTTTGCAATCTGTGCAGCAGCGAAAAAGATTGGCTATTTTGGGTTTATTGCAACAACGGCGCATGGCTTCATTGGGTTTACTGCAACGACGGGGCAGAGAATTGCTTTCATTGCTTTCATCTCCATCATTGGAGTTGATGGTGCCATGGCAGAGGAGATGCATGACCAGTGTCCAAGGTTTGCAAGAGCAACATTTACCTTCCACCATCAAACAAAACTTTGAAGGCTGTAATGGCATAAATGAAGCCAAAGTGAAGAAAATGGTAAAACGCAACAGCAATGATAGAAATGACAATGACAGAAGCCCATTAATGGAACAGCTACCAATGACAAAGGAGGATCATGTTCCTGGCAAGAAATACCAACATGTCTCAAATATGGCTTGGGATCCAATGGAATTAGAATATCTTGTACATATCCAGAAGAACATCAAGTTGTCTCAAACAACAAAAACTCTGTAA 3864 0.3905 MTVSASFSYDVFLSFRGSDTRYGFTGNLYKALSDRGIHTFIDEEELQRGDEIGPALIEAIKQSRMGILVFSKNYASSSFCLDELVKIIECVKAEGRLVLPLFYDVNPCHVRHQSGSYGEALAMHEERFTSSKENLKENMERLQKWKMALNQAANLAGKHYKLGNEYEHEFIGKIVKEVSNKINRPPLQVADYPIGLESRVQKVKLLPEFESDIGVHIVGIYGIGGMGKTTLARAVYNSIADRFEGLCFLDDVRENATKHGLVHLQETLLSEIVGEKDIKIGSVSKGISIMKHRLQRKKVLLILDDVDKLEQLRATVGGPNWFGSGSRVIITTRDKHLLASHGVDRKYEVEDLNEEEALELLTWNAFKDDKVDPCYKDISNQAVAYASGLPLALEVVGSLLFGKGIKEWESALDQYKKIPNKRIQDILKVSYNALEEDHQKIFLDIACCWKGYELAEVEDILCAHYGICMKYGIGVLVDKSLIKIKNGCVTLHELIEAMGKEIDRQESPKELGKHRRLWFHKDIIQVLAENTGTSEIEIICLDFPLFEEDKEVFVEWDGEAFKKMENLKALIIRNSHFSKGPTHLPNSLRVLEWWTYPLQDLPTDFHPNKLAICKLPRSCFTSLELTGISKKFMNLTVLNFDGTECLTQIPDISSLQNLVKLTFECCENLVAIHDSVGFLDKLKILSAFGCSKLMSFPPIKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDCGNVQLPSSIVMLPELAEIFALGCKGWLLPKQDEDDEKVSSMSSNVKCLCLSGCNLSDEYFPMVLAWFSNVKELELSSNNFTFLPECIKECRSLILLNLDNCEHLREIRGIPPNLEYFSAGNCKSLSFCCTAMLLKQELHETGNTMFCLPGTRIPAWFEQQSIGPSLSFWFRNKFPVMDLCFVIGPMGKDSILFRPILTINGNTMEMQFLTEKRFCFDFPALDYHILTIGTKYMKFGDYLDKPLSKNEWNHVVVSIGIDFDPSPKEMIVRQTGLHVIKPESSMDDIQFSDPYNQPSLKEKQRLVDIAGCPRQFMQQQTTFASLKLHVRQGRESFSLLPPQACKNNMNWDSNSSGISSTASVQGYEFASQNLRLDMGVLQSVQQRKRLAILGLLQQRRMASLGLLQRRGRELLSLLSSPSLELMVPWQRRCMTSVQGLQEQHLPSTIKQNFEGCNGINEAKVKKMVKRNSNDRNDNDRSPLMEQLPMTKEDHVPGKKYQHVSNMAWDPMELEYLVHIQKNIKLSQTTKTL 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02812 1287 Gene3D Ribonuclease Inhibitor 549 787 IPR032675 -
Pumo6g02812 1287 Pfam TIR domain 9 183 IPR000157 GO:0007165
Pumo6g02812 1287 Gene3D - 2 180 IPR035897 -
Pumo6g02812 1287 SMART till_3 8 155 IPR000157 GO:0007165
Pumo6g02812 1287 Coils Coil 132 152 - -
Pumo6g02812 1287 Gene3D Ribonuclease Inhibitor 788 915 IPR032675 -
Pumo6g02812 1287 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 184 - -
Pumo6g02812 1287 Pfam NB-ARC domain 206 434 IPR002182 GO:0043531
Pumo6g02812 1287 SMART AAA_5 214 353 IPR003593 GO:0016887
Pumo6g02812 1287 SUPERFAMILY L domain-like 553 907 - -
Pumo6g02812 1287 MobiDBLite consensus disorder prediction 1224 1244 - -
Pumo6g02812 1287 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 157 IPR035897 -
Pumo6g02812 1287 Gene3D - 351 435 IPR042197 -
Pumo6g02812 1287 PRINTS Disease resistance protein signature 217 232 - -
Pumo6g02812 1287 PRINTS Disease resistance protein signature 386 400 - -
Pumo6g02812 1287 PRINTS Disease resistance protein signature 293 307 - -
Pumo6g02812 1287 PRINTS Disease resistance protein signature 699 715 - -
Pumo6g02812 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 445 IPR027417 -
Pumo6g02812 1287 SUPERFAMILY "Winged helix" DNA-binding domain 422 527 IPR036390 -
Pumo6g02812 1287 Gene3D - 181 344 IPR027417 -
Pumo6g02812 1287 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 720 IPR044974 GO:0006952
Pumo6g02812 1287 ProSiteProfiles TIR domain profile. 7 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02812 Pumo-Chr6 67492649 67499533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02812 4 832 WRKY Transcription Factor Family AT4G12020 30.374 2.18e-82 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02812 - - gmx:100814962 2214.88