Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02811 ATGCATCCTGAGGTTGCTGACATTCCAGAGGCCCCACTGCCAGAACCCTTTGGCAAAAAAACTTGTGGATTGAATTGTGAAGATTCACATGTTGAAGAATTTACAGGCCAATCCGTGCATGTAAATTCTTCAGCGGAACTTTTGTCAATTTCCAATCAAACCGAAATGTTGCTGGAGCAATTCCAATTGTATCCATCTTTTCGTAGACACTTTTCTCGGAAGAATAATACCGACCAGGCAGAAAAGGCTCAATGCTTTTCACCTACAAAAACTTCTCCATCATCTCATGCATCTGATTGTCTGGATAAAGAAGAAAGTGAAAAAGCACTGCAGAAAGAATGTGTACCATTATCTGATGATGTGGCTAATCCGAATACGGAAAGAGGGGACCAGAAAGAATCATTTTCTATGTCTTTTCAACCTAGTGATACACCAGTACATATGATCCGCCCTCCACATTCTGTTATGTGCAATAATTCTGAAAGCCCAGATATGAAAAATATCTCCTGTGCTGCTGATAGTTTTATCACGGAGACACCTGCCCAGTCAGCACCTGCGAGATTATTGCCCATTTCTGATGTTAAGCTTCAGGATATGCCTACCCAAAAGTCAACATCGTCTCATAAGCCAGCAAAAAGAGTGCTTGACTTTTCACTCATGGAGGACAATGATGGCTTGGGCATTGGATTGGACAAGGTAGAATCTAGCAGAGCTCTGCATGAATTGGATAGCTTCCCTGAATCTAGCAGAGGATGTTCTGAGGATTGCAATTCTTTTGGGTCTGTGTCTGTACCTCAGGAGGCAGAAGAGAGCCTTGATTATGCTTTTGAGAAAATTATCCAAAATCAAGCTGGTTCAGATACATGGCATAAAAAATCTTCACCATTGCTGGATCTGGTTAATGTGATACACTCTATATTTCAATCTGTCCAAAGAATTCCAATCACAAAACAGGAGCTCCTGCATAAGATACTTATGAACAGTTTGGATTTTGTTGAGATTAGAGAAGTTGAAGAACAAATTGAGTCTCTGGAAAAGTTGGTGCCAGACTGGATCTGCAAGAAATTGGTTCCTACTGGAGATACTGTGTACTGCATCAATAAAGTGTCAGATTTGGACTCAGTACGATCAAGGCTTTCCAGCAACGAGACTGTTTGA 1158 0.4111 MHPEVADIPEAPLPEPFGKKTCGLNCEDSHVEEFTGQSVHVNSSAELLSISNQTEMLLEQFQLYPSFRRHFSRKNNTDQAEKAQCFSPTKTSPSSHASDCLDKEESEKALQKECVPLSDDVANPNTERGDQKESFSMSFQPSDTPVHMIRPPHSVMCNNSESPDMKNISCAADSFITETPAQSAPARLLPISDVKLQDMPTQKSTSSHKPAKRVLDFSLMEDNDGLGIGLDKVESSRALHELDSFPESSRGCSEDCNSFGSVSVPQEAEESLDYAFEKIIQNQAGSDTWHKKSSPLLDLVNVIHSIFQSVQRIPITKQELLHKILMNSLDFVEIREVEEQIESLEKLVPDWICKKLVPTGDTVYCINKVSDLDSVRSRLSSNETV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02811 385 MobiDBLite consensus disorder prediction 74 103 - -
Pumo6g02811 385 Gene3D - 286 384 IPR038090 -
Pumo6g02811 385 FunFam CDT1-like protein a chloroplastic 285 383 - -
Pumo6g02811 385 Coils Coil 334 354 - -
Pumo6g02811 385 MobiDBLite consensus disorder prediction 78 96 - -
Pumo6g02811 385 MobiDBLite consensus disorder prediction 128 143 - -
Pumo6g02811 385 PANTHER DNA REPLICATION FACTOR CDT1 2 380 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pumo6g02811 385 Pfam DNA replication factor Cdt1 C-terminal domain 294 352 IPR032054 -
Pumo6g02811 385 MobiDBLite consensus disorder prediction 119 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02811 176 379 Core DNA Replication Machinery Family AT2G31270 30.986 2.33e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02811 K10727 - gmx:102670055 654.825