Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02810 ATGCTTCGGATTTCAAGTGCGAGAAGGTTATCGAAAGCAGTTGATGAATCAATCGCATGCCCCACTCCTCAAAAGAATGCGGAACCATTAGCCATCAAATCCAGAGAGGGACAAACTAACCTTCCTGAAAAATACTCTACACTTGCAGATTTGTTTGGTCACATGAGTTGTTCGCTCAGATTGCTGCATCTGTGTAAAAAAACTCCAATTTTTCAAAATGTTTGCCGCCAGGTTGAAGTTCTTTCGAAGAGGAAATTCTCCCATGCCCATCTTGCGCAGATGAAGTATATACTCCCTGAAAGTGTATGTATAGATAAGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTGCCTGATATGAAGATCACCTTGAGCTTTGAGGTTGTGAAAGATTGCTCTGGACGAATCTGCTGA 417 0.4173 MLRISSARRLSKAVDESIACPTPQKNAEPLAIKSREGQTNLPEKYSTLADLFGHMSCSLRLLHLCKKTPIFQNVCRQVEVLSKRKFSHAHLAQMKYILPESVCIDKVLVHDKKSLCMVPDMKITLSFEVVKDCSGRIC 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02810 138 PANTHER DNA REPLICATION FACTOR CDT1 11 132 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pumo6g02810 138 SUPERFAMILY "Winged helix" DNA-binding domain 34 128 IPR036390 -
Pumo6g02810 138 SMART CDT1_2 41 131 IPR014939 -
Pumo6g02810 138 Pfam DNA replication factor CDT1 like 41 104 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02810 Pumo-Chr6 67471955 67472593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02810 41 131 Core DNA Replication Machinery Family AT2G31270 42.857 2.38e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02810 K10727 - gmx:102670055 241.891