Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02767 ATGGTTCCATCACTTTGTGCAAATGGTTGTGGCTTCTATGGTTCTGCTGCCAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGAAAGCGTCACCAAATCAAATGAGTGTGAAACCAAGAAGAACTCGAATGACCAAGTTTTTGTACTTGATCAGTCATCATCTATGTCTCGTAAACCATGTGCCTCTGAAGGTTCCATCACTGATGCTATGGTTGCTGTTTCCCTCACCGACCCTGAGGGAATGAATAACAAGAGAAAGAGGTGCAAGAGCTGCAACAAAAAGGTTGGGCTATTAGGGTTCGAATGCCGTTGTGGGGATGTGTTTTGTGGAACACATAGATACCCGGAGGAACATGCATGCAAAGTGGATTTGAAGGAAATTGGTCGTCAAGCTTTGTTGGAACAAAATCCTGTATGTATTGCTGATAAGTTAGAACATAGGATTTAG 459 0.4183 MVPSLCANGCGFYGSAANKNLCSKCYKDYLKESVTKSNECETKKNSNDQVFVLDQSSSMSRKPCASEGSITDAMVAVSLTDPEGMNNKRKRCKSCNKKVGLLGFECRCGDVFCGTHRYPEEHACKVDLKEIGRQALLEQNPVCIADKLEHRI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02767 152 Gene3D - 64 146 IPR035896 -
Pumo6g02767 152 FunFam Uncharacterized protein 1 59 - -
Pumo6g02767 152 Gene3D - 1 50 - -
Pumo6g02767 152 SMART AN1_Zf_4 92 129 IPR000058 GO:0008270
Pumo6g02767 152 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 36 - -
Pumo6g02767 152 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Pumo6g02767 152 ProSiteProfiles Zinc finger AN1-type profile. 86 132 IPR000058 GO:0008270
Pumo6g02767 152 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Pumo6g02767 152 FunFam Zinc finger AN1-type containing 6 66 147 - -
Pumo6g02767 152 SUPERFAMILY AN1-like Zinc finger 81 146 IPR035896 -
Pumo6g02767 152 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 149 - -
Pumo6g02767 152 Pfam AN1-like Zinc finger 92 126 IPR000058 GO:0008270
Pumo6g02767 152 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02767 Pumo-Chr6 66083842 66084300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02767 5 149 C2H2 Transcription Factor Family AT3G52800 36.129 5.53e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02767 - - gmx:102666624 251.906