Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02765 ATGTATTCTGACATAAATGCACGAATTGGAAGTTGCATGCCACTGTCTGCAATGCGCATTGGAACAATCATTCACAACGTTGAGTTGAACCCAGGGCAAGGTGGCAAGCTCGTCCGGGCTGCTGGAACTAGTGCAAAGATCTTGAAAGAGCCCACATCGACTTACTGTTTAATCCAATTGCCCTCGGGTGTTAAAAAGTTGATTGATTCTCGATGTAGGGCCACTGTTGGTGTTGTGTCTAATCCAAGCCATGGGGATCGCAAGCTTAGGAAGGCCGGACACAGCAGATGGCTTGGTCGAAGACCAGTTGTCCGAGGAGTGGCAATGAATCCTGTAGATCATCCTCATGGTGGAGGAGAGGGTAATTGGCCTGGACTTGCTTTGTTCAGTTCCATCATTTTCTTCCTAGTGCCAATGAAGGAGATTTGA 429 0.4779 MYSDINARIGSCMPLSAMRIGTIIHNVELNPGQGGKLVRAAGTSAKILKEPTSTYCLIQLPSGVKKLIDSRCRATVGVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGNWPGLALFSSIIFFLVPMKEI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02765 142 FunFam 60S ribosomal protein L2, mitochondrial 3 79 - -
Pumo6g02765 142 Pfam Ribosomal Proteins L2, C-terminal domain 9 123 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pumo6g02765 142 SMART Ribosomal_L2_C_2 7 127 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pumo6g02765 142 PANTHER RIBOSOMAL PROTEIN L2 3 122 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pumo6g02765 142 ProSitePatterns Ribosomal protein L2 signature. 102 113 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pumo6g02765 142 Gene3D Ribosomal protein L2, domain 3 80 131 IPR014726 -
Pumo6g02765 142 Gene3D - 3 79 IPR014722 -
Pumo6g02765 142 SUPERFAMILY Translation proteins SH3-like domain 9 125 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02765 Pumo-Chr6 65990449 65992598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02765 6 127 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 42.969 6.21e-24 91.7