Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02759 ATGCTCTCAGATGAACATCCAAAAGACTTTGAATTTGAGAACCACTCAGAGTCTATGCTTGCAATCTATGATGGAACTGAAAGAAGAAGAGAAATGGCAAAGAATTCGTTGGAGAGGTACACACATTATTATGAGCGGTGGGCCAGCAACCAATCTTTAAGGCAAAAGGCTCTAGTAGATCTACACCAGATGCAAACTGTTCATATTGAGAAGCTTAGTGACACGCAGTGCCAGCCTGAATCACAGCTTAAGTTCATAACGGAGTCCTGGTTACAGGTAAATGAATGTTTTATAGTTTACCTGCTTTCACATGTTTTTGGACTATTAGTAGTCAGTTATAATGAATATAGTATATCTGTGGCATCAGTATTGATCTTGCCCATATTTGTGACTAGAAACTACTTTGAGAATTTGGTGAGGGCATTAGAGAATGGTTTAGCTGATGTGGATAGTAATGGAGCTGCTTCTAGCAAAGCAACGAGCTCAAAAAATGCTGCAGGGAGCAGCAAGGGGAGAGGTGGAAGAGGAAAAGCGACTATTCGAACTATCATATCCAGCAGAATGACTGATGATAATCATTGGTCTTGTGAGCATTGTACTTATGCAAATGTTAGGTCTGCCACCACATGCCAAATGTGCAATCAGCAACGTCGATGA 657 0.4079 MLSDEHPKDFEFENHSESMLAIYDGTERRREMAKNSLERYTHYYERWASNQSLRQKALVDLHQMQTVHIEKLSDTQCQPESQLKFITESWLQVNECFIVYLLSHVFGLLVVSYNEYSISVASVLILPIFVTRNYFENLVRALENGLADVDSNGAASSKATSSKNAAGSSKGRGGRGKATIRTIISSRMTDDNHWSCEHCTYANVRSATTCQMCNQQRR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02759 218 ProSitePatterns Zinc finger RanBP2-type signature. 194 213 IPR001876 -
Pumo6g02759 218 MobiDBLite consensus disorder prediction 151 168 - -
Pumo6g02759 218 ProSiteProfiles Zinc finger RanBP2 type profile. 190 218 IPR001876 -
Pumo6g02759 218 SUPERFAMILY Ran binding protein zinc finger-like 190 217 IPR036443 -
Pumo6g02759 218 SMART zf_4 192 216 IPR001876 -
Pumo6g02759 218 MobiDBLite consensus disorder prediction 151 177 - -
Pumo6g02759 218 Gene3D - 4 171 - -
Pumo6g02759 218 Gene3D - 188 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02759 Pumo-Chr6 65963979 65965655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02759 21 217 ARIADNE family AT1G65430 45.417 2.00e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02759 K11968 - gmx:100810427 263.462