Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02758 ATGAGGATAGCTACCAAAATGAGTTTGACTGCAAATATGACTGGCTGCTGCATGGCACCTGAACATAAGTTTGAGGACAAAAGTTATGCTGTTAATTCATTTCATCTTTTTGATGTGCCGTTAGCTTTTTGGTTGTTCTTGGTGGCAAGCTCTTACTTTCTCTTGAGCAAAAATGTCAATGTTTTTGGTGGTTGTAGAGGAAAACATGCACATAAAGTTTCTTCATCTGACAGAACTATCTCAAATGCAAGCAAAGAGAATGATGCAACTGCTGCAAATGATACGTTTAGCTGTTCTCATAGAATTTCATCCAATAACAGCTGGAGTGAGCTATGCACCAAGTGTGATGCTTACTGTGGGATTTCAGATTTTGACAAAGCAAGTTACATGCATTCTTTAGTCAGTCTCGAAGATGAAGACTTTGAGTGGCTCTCAGATTCAATGCCTTGTGGACTTTCATATGAGAACCCTTCAACTCCTCTTAGCTACAAGTGTGATGCTTACTATGAGATTTCAGATTTTGAGCAAGTGAGTTACATGCATTCTTTACTCAGTCTTGATGATGAAGATTCTGAGTGGCTTTCAGATTCGAAGTCTTTTGGATGTTCTTCAGAGAACCCTTCAACTCCTTTTAGCTACAAGTGTAATGCTTTCTCTCAGATTTCAGCTTTGGAGAAAGCAAGTTACATGCATTCTTTACTCAGTCTTGAAGATGAAGACACTGAGTGGCTCTCAGATTCGATGTCTTTTGGACGTTCATCTGAGGAGCCTTCAACTCCTCTTAACTACAAGTGTGATGCTTACTATGAGATTTCAGATTTTGACAAAGCAAGTTACATGCATTCTTTACTTAGTCTTGAAGATGAAGACTCTGAGTGGCTCTCAGATTCGAAGTCTTATGGATGTTCATCTGAGAACCCTTCAACTCCTATTAGCTACAAGTGTGATGCTTCTGAGATTTCAGATTTGGACAAAGCAAGTTACTTGCAATCTTTACTCAGTCTTGAAGATGAAGACTCGGAGTGGCTCTCAGACTCGAAGCCTTTTGGAGGTTCATCTGAGAACCCTTCAACTCCTCTTAGCTACAAGTTTGATGCTGCTTCTGAGATTTCAGATTTTGACAAAGAAAGTTACTTGCATTCTTTTCTCAGTCTTGAAGATGAAGACTCTGAGTGGTTCTCAAATTCAAAGTCTTTTGGATGTTCATCTGAGAGCATTTCAACTCCTCTTAGCTACAAGTTTGATGCTTCTTCTGAGATTTCAGCTTTGGACAAAGCAAGTTACATGCTTTCTTTACTCAGTCTTGAAGATGAAGACTCCGAGTGGCTCTCAGATTCAAAGTCTTTTGGATGCTCATCTGAGAACCCTTCAACTCCTCTTAGTAACAAGTGTGATGCTTTTTCTGATATTTCAGATTTGGACAAAGTAAATTACATGCATTCCTTAATCAGCCTTGAAGATGAAGACTCTGACTGGCTCTCAGATTCTAAGTCTTATGGATGTTCATCTGAAAATTCAACTCCTCCTAGCTACAAGTTTGATGCTTCCTATGAGATTTCAGATTTGGACAAAGCAAGTTACTTGCATTCCCTACTCATTCTTGAAGATGAAGACTTTGAGTGGCTCTCAGATTCGAGTAGTTGGAGTATCGTGGTCCCTCCTTCAGTGTCTACTAGTTCCTCATTCACTGGAGTACACTGTGGCAACCCAGAAGACAATAATATTTCAGTGGAGCATCTATTAGAAACTGCAGATGTAGAAGAAGAGTTCAATGCTGATGAACCACTTTATCTACATAGGCTATGCCTTGGTGCATGGTCAGACCATGGTGAAAGGACTGGTGGTTTTTATGCTTGCAATCGTTATGAAGCAGCTAAACAAGAGGGAGTGTATGATGAAACTGAAAGAAGAAGAGCAATGGCAAAGAATTCGTTGGAGAGGTACACACATTATTATGAGCGGTGGGCCAGCAACCAATCTTCAAGGCAAAAAGCTCTAGCAGATCTACACCAGATGCAAACTGTTCATATTGAGAAGCTTAGTGACACACAGTGCCAGCCTGAATCACAGCTTAAGTTCATAACGGAGTCCTGGTTACAGATAGTTGAATGCAGGAGGGTGCTGAAATGGACATATGCATATGGCTACTATTTACCCGAGCATGAACATGCTAAAAAACAGTTCTTTGAGTACTTACAAGGTGAGGCAGAATCTGGTTCGGAGAGACTTGATCAATGTGCTGAAAAGGAACTACAGCTATTCCTCAATGCTGATGGCCCATCTAGAGAATTCAATGACTTTCGTACCAAACTAGCTGGATTGACCAGTGTGACTAGAAACTACTTTGAGAATTTGGTGAGGGCATTAGAGAATGGTTTAGCTGATGTGGATAGTAATGGAGCTGCTTCTAGCAAAGCAACGAGCTCAAAAAATGCTGCAGGGAGCAGCAAGGGGAGAGGTGGAAGAGGAAAAGCGACTATTCGAACTATCATATCCAGCAGAATGACTGATGATAATCATTGGTCTTGTGAGCATTGTACTTATGCAAATGTTAGGTCTGCCACCACATGCCAAATGTGCAATCAACAGCGTCGATGA 2598 0.4072 MRIATKMSLTANMTGCCMAPEHKFEDKSYAVNSFHLFDVPLAFWLFLVASSYFLLSKNVNVFGGCRGKHAHKVSSSDRTISNASKENDATAANDTFSCSHRISSNNSWSELCTKCDAYCGISDFDKASYMHSLVSLEDEDFEWLSDSMPCGLSYENPSTPLSYKCDAYYEISDFEQVSYMHSLLSLDDEDSEWLSDSKSFGCSSENPSTPFSYKCNAFSQISALEKASYMHSLLSLEDEDTEWLSDSMSFGRSSEEPSTPLNYKCDAYYEISDFDKASYMHSLLSLEDEDSEWLSDSKSYGCSSENPSTPISYKCDASEISDLDKASYLQSLLSLEDEDSEWLSDSKPFGGSSENPSTPLSYKFDAASEISDFDKESYLHSFLSLEDEDSEWFSNSKSFGCSSESISTPLSYKFDASSEISALDKASYMLSLLSLEDEDSEWLSDSKSFGCSSENPSTPLSNKCDAFSDISDLDKVNYMHSLISLEDEDSDWLSDSKSYGCSSENSTPPSYKFDASYEISDLDKASYLHSLLILEDEDFEWLSDSSSWSIVVPPSVSTSSSFTGVHCGNPEDNNISVEHLLETADVEEEFNADEPLYLHRLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRRAMAKNSLERYTHYYERWASNQSSRQKALADLHQMQTVHIEKLSDTQCQPESQLKFITESWLQIVECRRVLKWTYAYGYYLPEHEHAKKQFFEYLQGEAESGSERLDQCAEKELQLFLNADGPSREFNDFRTKLAGLTSVTRNYFENLVRALENGLADVDSNGAASSKATSSKNAAGSSKGRGGRGKATIRTIISSRMTDDNHWSCEHCTYANVRSATTCQMCNQQRR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02758 865 SMART zf_4 839 863 IPR001876 -
Pumo6g02758 865 MobiDBLite consensus disorder prediction 798 825 - -
Pumo6g02758 865 MobiDBLite consensus disorder prediction 798 815 - -
Pumo6g02758 865 SUPERFAMILY Ran binding protein zinc finger-like 837 864 IPR036443 -
Pumo6g02758 865 Gene3D - 600 796 - -
Pumo6g02758 865 Pfam Ariadne domain 632 793 IPR045840 -
Pumo6g02758 865 ProSitePatterns Zinc finger RanBP2-type signature. 841 860 IPR001876 -
Pumo6g02758 865 ProSiteProfiles Zinc finger RanBP2 type profile. 837 865 IPR001876 -
Pumo6g02758 865 PANTHER T20M3.17 PROTEIN 212 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02758 Pumo-Chr6 65929788 65934086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02758 567 864 ARIADNE family AT1G65430 64.765 4.39e-126 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02758 K11968 - pvu:PHAVU_005G152200g 606.29