LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo6g02751	ATGGCACTGTGCAACCGCGTCAGATCGGGAATCTCTCTCTTCAACAAATCCGTGTTCCTAACTTCCCAACGATCCACTCTCCAACGATCCCTCGTTGCCCCTTCCATTTCCCTCGCCTCCAGAAATTACGCCAACGTGCCGGGGCAAAAGGATAACAAAGTTAAGGTCCCTTTGGCTTTGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTACATTGCATCTGTGAAAGCTAATGCAGTGGAAAAGGTTGAGTCTGAGCTTCTGCAATTTGTTGAGGCAGTAAAGAATAGTGCCACATTTTCACAGTTTGTAAAGGACATTTCTGTGGCTAAGGATGTTAGAGTAAAAGTCATCCAGGATATTTGTGGTGAAGCTAAGTTTTCAGACGTTACAAAGAACTTCCTTGTTATTGTTGCTGAGAATGGAAGGCTTAAAAACATACACACCATTGCAAAGAGGTTCAAAGAGTTGGCAATGGCATATAAGGGAGAAGTGAAAGCAACTGTGACCACTGTCGTTGTAATATGCTTAATTACTCCATTACCTAACTATATTTTTTATACCAGTCCTCTTCCCCCTGAAGAGGAAAAGGCATTGAAGGAGACTCTTCAGGAAATAATAGGTTCTGGAGCGAAGGTTAATCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTCTTGTGTTGGAATTTAGCCAGAAGGTCTTTGACATGTCTATCAGGACCAGGGCACAACAGATGGAGAGGATCCTCCGGGAGCCCGTATCCATTGCTAACATCTAG	786	0.4364	MALCNRVRSGISLFNKSVFLTSQRSTLQRSLVAPSISLASRNYANVPGQKDNKVKVPLALFGGSGNYASALYIASVKANAVEKVESELLQFVEAVKNSATFSQFVKDISVAKDVRVKVIQDICGEAKFSDVTKNFLVIVAENGRLKNIHTIAKRFKELAMAYKGEVKATVTTVVVICLITPLPNYIFYTSPLPPEEEKALKETLQEIIGSGAKVNLEQKIDPSILGGLVLEFSQKVFDMSIRTRAQQMERILREPVSIANI	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo6g02751	261	ProSitePatterns	ATP synthase delta (OSCP) subunit signature.	214	233	IPR020781	GO:0015986\|GO:0016020\|GO:0046933
	Pumo6g02751	261	PANTHER	ATP SYNTHASE DELTA CHAIN	190	254	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	Hamap	ATP synthase subunit delta [atpD].	59	254	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	PRINTS	ATP synthase delta subunit signature	144	158	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	PRINTS	ATP synthase delta subunit signature	63	82	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	PRINTS	ATP synthase delta subunit signature	133	144	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	Pfam	ATP synthase delta (OSCP) subunit	65	174	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	Pfam	ATP synthase delta (OSCP) subunit	188	252	IPR000711	GO:0015986\|GO:0046933
	Pumo6g02751	261	SUPERFAMILY	N-terminal domain of the delta subunit of the F1F0-ATP synthase	64	164	IPR026015	-
	Pumo6g02751	261	Gene3D	-	64	156	IPR026015	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo6g02751	Pumo-Chr6	65787594	65791680	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo6g02751	3	261	Primary Pumps ATPases	AT5G13450	42.471	1.07e-59	186

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo6g02751	K02137		-	gmx:100790990	412.92