Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02741 ATGGAGTGCAATAAGGATGAGGCTACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTTGCTGCAAAGGATACATTGGGTGCAAAGAAATTTGCTTTGAAGGCCCTAAATTTATTTCCTGATCTTGAGGGTATTTCTCAAATGGTAGCAACACTTGATGTGTATATTTCTGCTGAGAATAAAACAAATGGAGAAGCAGATTGGTATGGTGTGCTTGGTGTAGACCCCCTTGCTGACGATGATACAGTCAGGAGACAATACAGGAAGCTAGCTCTCCTGCTTCACCCTGATAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTCATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCAGCATATGATAAGAGAAGTGGAAAAGGACGGAAAGTTTCTAGTAAGTTTGGAGGTTCATCATCACAAAAAGGGACTAATGGTAGTTACAATTTTACTAAGACTGCCCCTTCAAGTGCAACTACTCAGAAGAATACTGCAAAAGAGCACGCTTCATCTTCTACTCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCCGTCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAACCTTAAACTCTTATGTCCCAACTGCCACTGA 645 0.4047 MECNKDEATRAKEIAERKFAAKDTLGAKKFALKALNLFPDLEGISQMVATLDVYISAENKTNGEADWYGVLGVDPLADDDTVRRQYRKLALLLHPDKNKSIGADGAFKLISEAWSLLSDKAKRAAYDKRSGKGRKVSSKFGGSSSQKGTNGSYNFTKTAPSSATTQKNTAKEHASSSTHKSKSNTFWTVCRRCKMQYEYLRVYLNLKLLCPNCH 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02741 214 Gene3D DnaJ domain 63 190 IPR036869 -
Pumo6g02741 214 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Pumo6g02741 214 SMART dnaj_3 65 122 IPR001623 -
Pumo6g02741 214 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pumo6g02741 214 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pumo6g02741 214 PRINTS DnaJ domain signature 122 141 IPR001623 -
Pumo6g02741 214 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pumo6g02741 214 Pfam DnaJ domain 66 127 IPR001623 -
Pumo6g02741 214 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pumo6g02741 214 PANTHER BNAC03G44070D PROTEIN 1 214 - -
Pumo6g02741 214 MobiDBLite consensus disorder prediction 137 172 - -
Pumo6g02741 214 MobiDBLite consensus disorder prediction 128 177 - -
Pumo6g02741 214 CDD DnaJ 66 119 IPR001623 -
Pumo6g02741 214 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02741 Pumo-Chr6 65680570 65681214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02741 4 214 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.790 3.61e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02741 - - gmx:100816712 397.127