Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02732 ATGGCTTGTTCTTGTTCAGTGCACCTCCTCCTTCTTCTAACCTTCTCACTCCTGGCTCTGTTCTTTAACCCAACATGTGTCTATGGTAATAATGATGAGCTAAGAGCACTGATGGACCTGAAATCCAGTTTAGATCCAGAGGGGCAGTTTCTGTCCTCATGGACCATGGATGGCACCCCATGTGGTGGTTCCTTTGAGGGAGTGGCTTGCAATGAGAAGGGTCAGGTGGCAAATGTTTCTCTTCAAGGAAAAGGCCTCTCTGGGAAGCTTTCACCAGCCATTGCTGGACTCAAGCACTTGACAGGACTCTACTTGCACTACAACTCTTTGTATGGAGAGATTCCAAGGGAAGTTGCAAACTTGACTGAGCTCAGTGACTTGTACTTGAATGTGAATCACTTGTCTGGTGAAATCCCACCTGAGATTGGGAAGATGGAGAATCTGCAAGTTTTGCAGCTTTGTTATAATCAGTTAACAGGAAGCATACCTACACAGCTTGGTGATTTGCAAAAGCTTAGTGTTCTTGCTCTTCAGTCAAATGTGTTAGCTGGAGCTATCCCTGCTAGTCTAGGTGATTTGGGAATGTTGATGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAAGCTAGCTGATCTTGCTTCACTGCGAGTTCTGGATGTTCACAACAATACTCTCTCCGGGAATGTACCTCCTGCTCTGAAGAGACTAGAGGATGGATTTGTGTATGAACATAATGTGGGGTTATGTGGAGTTGAGTTTTCATCCTTGAAAGCTTGCACTGCTTCAGATCATGTCAATCTCACTCGACCGGAACCTTATGGAGCAGGAGTTGGTGGTCTGTCTAGAGATATCCCAGAAACTGCTAATGTAAAGTTGCCTTGCAATACAACTCAGTGCCAAAATCCATCAAAATCCAAACAAGCAACATCTATTGCAATTGGCATTGTTCTAGTTACAATTGCAATATCGGCAATTGGTATTTTGACCTTCACTGTGTATCGTCGGCGGAAACAAAAGCTTGGAAGCGCGTTTGATATCTCTGAAGGCCGTCTAAGTACAGATCAAGCCAAGAGTATATACAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTACTCTAATGGATGGGACCCTTTGGCTGATAGCAAGAATTTCAATGGGGATAGGCAAGACATGTTCCAGAGTTTCAGATTCAACTTAGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCGGAGTTGAATTTGTTGGGGAAGAGCAACTTTAGTGCAACGTATAAAGGAGTTCTAAGAGATGGATCTGTTGTTGCTGTCAAGAGTATTAGTAAAACTAGTTGCAAATCGGATGAAGCTGAGTTTTTGAAGGGATTAAACATCTTGACCTCACTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTTTGTTGCTCAAGGGGACGAGGTGAATGCTTCCTGGTTTATGACTTTGTTTCTAATGGAAATCTGACGCGCTACCTTGATGTGAAGGAAGGTGATGGAGAAGTCCTCGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCATACAAAGCAAAAAAATCGACTCTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTCATCGATCAGCGGTACAACCCGTTGCTTTCAGATTCCGGCCTGTACAAGCTTCTCACCAATGACATTGTCTTCTCTGCGCTAAAGGGTAGTGCAGCAAAGGGCTACCTAGCTCCAGAATACACCACTACCGGCCGGTTCACAGAGAAAAGTGATGTTTATGCGTTTGGAGTCCTTCTTTTCCAGATCCTCACGGGGAAGCAGAAGATCACAAGCGCAATGCGCCTTTCTGCTGAGTCCTTCAAGTTCCCAGAATTTATTGACCCAAACTTGCACGGGCAGGTTCTTCGAATATGA 1953 0.4393 MACSCSVHLLLLLTFSLLALFFNPTCVYGNNDELRALMDLKSSLDPEGQFLSSWTMDGTPCGGSFEGVACNEKGQVANVSLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGEIPREVANLTELSDLYLNVNHLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGDLQKLSVLALQSNVLAGAIPASLGDLGMLMRLDLSSNNLFGSIPTKLADLASLRVLDVHNNTLSGNVPPALKRLEDGFVYEHNVGLCGVEFSSLKACTASDHVNLTRPEPYGAGVGGLSRDIPETANVKLPCNTTQCQNPSKSKQATSIAIGIVLVTIAISAIGILTFTVYRRRKQKLGSAFDISEGRLSTDQAKSIYRKNGSPLVSLEYSNGWDPLADSKNFNGDRQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVSNGNLTRYLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKAKKSTLVHQNISAEKVLIDQRYNPLLSDSGLYKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKQKITSAMRLSAESFKFPEFIDPNLHGQVLRI 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02732 650 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Pumo6g02732 650 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Pumo6g02732 650 FunFam Leucine-rich repeat receptor-like kinase 32 141 - -
Pumo6g02732 650 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 78 621 - -
Pumo6g02732 650 SUPERFAMILY L domain-like 31 240 - -
Pumo6g02732 650 FunFam Protein NSP-INTERACTING KINASE 2 143 265 - -
Pumo6g02732 650 Gene3D Phosphorylase Kinase; domain 1 385 493 - -
Pumo6g02732 650 FunFam Protein NSP-INTERACTING KINASE 2 386 493 - -
Pumo6g02732 650 Gene3D Ribonuclease Inhibitor 181 248 IPR032675 -
Pumo6g02732 650 Gene3D Transferase(Phosphotransferase) domain 1 494 649 - -
Pumo6g02732 650 Pfam Protein tyrosine and serine/threonine kinase 419 623 IPR001245 GO:0004672|GO:0006468
Pumo6g02732 650 SUPERFAMILY Protein kinase-like (PK-like) 392 621 IPR011009 -
Pumo6g02732 650 ProSiteProfiles Protein kinase domain profile. 415 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02732 Pumo-Chr6 65607950 65611680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02732 1 528 Miscellaneous Gene Families AT4G22730 55.185 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pumo6g02732 PK_Tyr_Ser-Thr 3.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02732 - - gmx:100789253 1184.47