Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02715 ATGAGTTTGGAGAAGTACACATTGGCATTGGCATTGGCATTGGCATTGGCATTGATATTGTTATTGTTAGTTATTACTACTATCTCTTCAATCTTCATTCATCTCTCTTCTAAGGTGAGTTCTTTACGTGTGGTGGCAATGGAAGCTGTGTTGAGAAGGCACTTTCTGTGGCTTGTTGTGGCAATGGTGCTTGTTGTGCAGCTTCTCTCTCCGTTTGCTTCAACTCTCAGTGATGAAGGACAAGCGTTGATGAAGATTAAGGCTTCATTCAGCAATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGATGACTTCTGTTCTTGGCGTGGAGTCTTGTGCGACAATGTCAGCCTTACTGTGCTTTCACTGAATTTGTCAAGCTTGAACCTCGGTGGGGATATATCACCGGCCATTGGTGATTTAGTAAACTTGCAATCCATAGACCTGCAGGGAAATAAACTAACTGGTCAAATTCCGGATGAAATTGGGAACTGTGCTGCACTTATTTATCTGGATTTGTCTGATAATCAACTATATGGTGACATACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATCCCCTCAACATTAACCCAAATTCCAAACTTGAAGACTCTTGATCTTGCACGAAATAGACTCACTGGTGAGATTCCCAGACTGCTCTATTGGAATGAAGTCTTGCAGTACCTGGGGTTGCGAGGGAACATGTTGAGCGGAACTCTGTCCTCTGATATCTGTCAATTGACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTGACTGGCACCATACCTGACAGCATTGGAAACTGTACAAATTTTGCAATCTTGGATCTCTCATATAATCAGATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTAGCTACTTTGTCGCTTCAAGGAAATAGACTAACCGGGAAGATTCCGGAAGTCATTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAGCTAATAGGACCCATCCCTCCCATACTAGGCAATTTGTCTTATACTGGAAAGCTGTACCTTCATGGAAACATGCTTACTGGACCAATTCCTCCAGAACTTGGCAATATGTCAAGACTAAGCTACCTGCAATTGCATGACAATCAACTAGTAGGCCAAATTCCTGATGAACTCGGGAAGCTCGAACATTTGTTTGAATTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGGGCTTTAGCAGCCTTGAGAGCTTGACTTACTTAAATCTTTCTGCAAACAACTTCAAAGGGAGTATACCTGTTGAGTTGGGCCATATAATAAATATTGACACGCTGGATCTATCTAGCAATAATTTTTCAGGGCATGTTCCGGGGTCTGTTGGTTATCTTGAGCATCTTCTGACCTTGAACTTGAGCCATAATAGTATTCAGGGTCCCTTGCCTGCTGAATTTGGGAATCTTAGAAGCATACAGATTATTGATATGTCATTCAACTATCTGTCTGGTAGCATCCCTCCAGAAATTGGTCAGCTGCAGAATCTCGAGTCTCTGATTTTGAACAACAATGATTTGCATGGGGAGATTCCAGATCAGCTTACCAATTGCTTAAGTCTTAACTTCCTGAATGTCTCATACAATAACTTATCTGGGGTCATTCCTCTTATGAAGAACTTCTCACGGTTTTCTGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTAGGATCCATATGTGATCCTTACATGCCAAAATCCAGAGTGGTTTTTTCAAGGGCTGCAATTGTTTGTCTCATAGTTGGTACCATTACATTATTGGCCATGGTAACTATAGCAATCTACAGATCAAGACAATCAATGCAATTGATTAAAGGATCTAGTGGAACTGGGCAAGGGCCACCCAAGCTTGTAATTCTTCATATGGGCTTGGCCATCCATACCTTTGATGATATTATGAGAGTTACTGAGAATCTCAATGAGAAGTATATTGTAGGGTATGGTGCCTCTAGTACTGTGTACAAGTGTGTTTTAAAGAATTCCCGGCCAATTGCAATTAAACGACTACACAACCATCATCCACACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAGTATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTTGAAAAAGGTAAAACTTGATTGGGAGGCACGCTTGAAGATTGCCGTGGGAGCTGCTGAAGGACTTGCTTACCTCCATCACGACTGCAATCCTAGAATCATTCACAGGGATATAAAGTCCTCAAATATCCTGCTAGATGAGAACTTTGAAGCTCGCCTCTCTGATTTTGGCATTGCCAAATGTTTGTCAACTACAAGAACTCATGCATCAACATTTGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCGGACATCTAGGCTGAATGAAAAATCCGATGTGTATAGCTTTGGCATTGTTCTACTTGAACTACTGACTGGGAAGAAAGCAGTGGACAATGATTCCAACTTGCATCATTTGGTATTATCCAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCAGACCCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACAAAAAGAAATCCTTCCGAGAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCACCACCCAGTAACATCTTTGGCCCTCCTTCAAAGACCATTGATTATGCACAATTTGTGATTCAAAAGGGAAACAAAAACAACCTCAACCCCCCTCAAATGGATAGGCTACAACCTCAGCATTTCTCTAATGATCAATGGTTTGTTCGCTTTGAGGATGTTGTATCAAATAACAGCCTCTAG 3024 0.4127 MSLEKYTLALALALALALILLLLVITTISSIFIHLSSKVSSLRVVAMEAVLRRHFLWLVVAMVLVVQLLSPFASTLSDEGQALMKIKASFSNVADVLHDWDDLHNDDFCSWRGVLCDNVSLTVLSLNLSSLNLGGDISPAIGDLVNLQSIDLQGNKLTGQIPDEIGNCAALIYLDLSDNQLYGDIPFSISKLKQLVFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSSDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFAILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELIGPIPPILGNLSYTGKLYLHGNMLTGPIPPELGNMSRLSYLQLHDNQLVGQIPDELGKLEHLFEFNVHGNHLSGSIPLGFSSLESLTYLNLSANNFKGSIPVELGHIINIDTLDLSSNNFSGHVPGSVGYLEHLLTLNLSHNSIQGPLPAEFGNLRSIQIIDMSFNYLSGSIPPEIGQLQNLESLILNNNDLHGEIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSRFSADSFIGNPLLCGNWLGSICDPYMPKSRVVFSRAAIVCLIVGTITLLAMVTIAIYRSRQSMQLIKGSSGTGQGPPKLVILHMGLAIHTFDDIMRVTENLNEKYIVGYGASSTVYKCVLKNSRPIAIKRLHNHHPHNSREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWEARLKIAVGAAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEARLSDFGIAKCLSTTRTHASTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLVLSKADNNTIMETVDPEVSITCMDQTHVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPAPPSNIFGPPSKTIDYAQFVIQKGNKNNLNPPQMDRLQPQHFSNDQWFVRFEDVVSNNSL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02715 1007 CDD STKc_IRAK 682 942 - -
Pumo6g02715 1007 SMART serkin_6 676 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02715 1007 SUPERFAMILY Protein kinase-like (PK-like) 654 942 IPR011009 -
Pumo6g02715 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 313 401 - -
Pumo6g02715 1007 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Pumo6g02715 1007 Pfam Leucine rich repeat N-terminal domain 77 117 IPR013210 -
Pumo6g02715 1007 FunFam Piriformospora indica-insensitive protein 2 402 496 - -
Pumo6g02715 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 241 312 - -
Pumo6g02715 1007 FunFam Leucine-rich repeat receptor-like protein kinase 505 599 - -
Pumo6g02715 1007 SMART LRR_typ_2 144 168 IPR003591 -
Pumo6g02715 1007 SMART LRR_typ_2 216 240 IPR003591 -
Pumo6g02715 1007 SMART LRR_typ_2 383 407 IPR003591 -
Pumo6g02715 1007 SMART LRR_typ_2 479 502 IPR003591 -
Pumo6g02715 1007 SMART LRR_typ_2 264 288 IPR003591 -
Pumo6g02715 1007 SMART LRR_typ_2 431 455 IPR003591 -
Pumo6g02715 1007 SMART LRR_typ_2 527 551 IPR003591 -
Pumo6g02715 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 215 944 - -
Pumo6g02715 1007 Gene3D Ribonuclease Inhibitor 313 600 IPR032675 -
Pumo6g02715 1007 SUPERFAMILY L domain-like 336 590 - -
Pumo6g02715 1007 Pfam Leucine Rich repeat 217 232 IPR001611 GO:0005515
Pumo6g02715 1007 Pfam Leucine Rich repeat 288 304 IPR001611 GO:0005515
Pumo6g02715 1007 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Pumo6g02715 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 752 952 - -
Pumo6g02715 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 647 751 - -
Pumo6g02715 1007 Gene3D Ribonuclease Inhibitor 76 240 IPR032675 -
Pumo6g02715 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 76 240 - -
Pumo6g02715 1007 SUPERFAMILY L domain-like 75 360 - -
Pumo6g02715 1007 Gene3D Ribonuclease Inhibitor 241 312 IPR032675 -
Pumo6g02715 1007 Gene3D Phosphorylase Kinase; domain 1 651 751 - -
Pumo6g02715 1007 Gene3D Transferase(Phosphotransferase) domain 1 752 949 - -
Pumo6g02715 1007 ProSiteProfiles Protein kinase domain profile. 676 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02715 1007 Pfam Protein kinase domain 679 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02715 1007 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Pumo6g02715 1007 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Pumo6g02715 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02715 Pumo-Chr6 65037586 65046325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02715 51 1007 Receptor kinase-like Gene Family AT5G62230 72.832 0.0 1400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pumo6g02715 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02715 K20718 - gmx:100305433 1683.69