Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02709 ATGATGAAGCTTGTTCTTCTTTTGTTCTGCTTTTTTGCCTCAGCACTGACCCTTTCAGTATCGGATGCTAAATCTGCTTCTGTGCAACCTCATGTAGCTGACAAATCTTTCTCTGTTGGATATATTCAGATGAAGACTGCAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGTTCATCGCCCAAATTTACAACGGATAAGATCGGTATTACGTTTGGGGATGCTTATGGCAACAAGGTATATGAGCCAAGACTGGATGATCCAATTTCAAGGACATTTGAGCAGTGTTCTTCAGATACATTTCAGATAGATGGTGCATGTGCATCTCCCATTTGCTATGTGTACCTATATAGATCTGGGGCAGAGGAAGGTTGGGAACCTGAGAGCGTGAAAATCTATGGCTACAACTCAGAGCCAATTACTTTTGATTTCAACACCTCCATCCCCAATGGCACGTGGTATGGGTATAATTGGTGCAAGACTCCTTCTTCTTCATACCAACTATCCCCTCAGAAATGGCTCATGAGTTTGGTTCTTGGCTTTGCTCTTAGTTTTTGGCTTTAA 570 0.4211 MMKLVLLLFCFFASALTLSVSDAKSASVQPHVADKSFSVGYIQMKTAANCSYLVVISTSCSSPKFTTDKIGITFGDAYGNKVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYRSGAEEGWEPESVKIYGYNSEPITFDFNTSIPNGTWYGYNWCKTPSSSYQLSPQKWLMSLVLGFALSFWL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02709 189 Gene3D PLAT/LH2 domain 47 157 - -
Pumo6g02709 189 CDD PLAT 50 161 - -
Pumo6g02709 189 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 2 164 - -
Pumo6g02709 189 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
Pumo6g02709 189 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 158 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02709 Pumo-Chr6 64920512 64922514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02709 - - gmx:100305526 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00816 3 12880253 12881537 Pumo6g02709 6 64920512 64922514 PCT