Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02702 ATGTCGTATCTCCGGTTTGAATTGTTCCAGTTTTACGGGGTTGGTGATCAAGCTCAATGGCCAAGATCGGGTGATCAGCCTTCTCCATCTGGCCTTAAAGTTGGTCATGAAAGTGTCACTTTAGAGCCACTACAATTCAGTTTGGTTGTAATTGAAGCAGCAACCAATAACTTTTCAGATGATAATAGGATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTCTTGATGGACGACAAATAGCAGTAAAAAGACTCTCAAAAAGCTCTAAGCAAGATTCTCAACGACCAAAGTTTTTAAGCCGGCTTGAACGCTATAATATTATAGGAGGGATTGCTCGAGGAATTCTTTATTTACATGAACATTCTCGCCTCAAAGTCATACATCGTGATCTCAAACCTAGTAATGTTTTATTAGATGAGAATATGATACCAAAAATTTCAGATTTTGGTCTGGCTAGAATTGTTGAAATAGATCAAGATCAAGGGAGTACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATTTTCAGAAAAATCGGATATTTTTAGTTTTGGAGTCATGGTTCTAGAGATTATTACAGGAAAAAAGAATCTAAGTTCTCATGAACCACATCGTGTTGCTGATGGCCTCGAGTTATGTTTGGAGACAGTGGAAGGGACAAACACCATTAATCATACTGGACCCAAGTATTAA 729 0.3759 MSYLRFELFQFYGVGDQAQWPRSGDQPSPSGLKVGHESVTLEPLQFSLVVIEAATNNFSDDNRIGKGGFGEVYKGILLDGRQIAVKRLSKSSKQDSQRPKFLSRLERYNIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMIPKISDFGLARIVEIDQDQGSTNRIVGTYGYMSPEYAMFGQFSEKSDIFSFGVMVLEIITGKKNLSSHEPHRVADGLELCLETVEGTNTINHTGPKY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02702 242 SUPERFAMILY Protein kinase-like (PK-like) 39 218 IPR011009 -
Pumo6g02702 242 Gene3D Transferase(Phosphotransferase) domain 1 107 236 - -
Pumo6g02702 242 SMART serkin_6 58 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02702 242 Pfam Protein kinase domain 102 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02702 242 Gene3D Phosphorylase Kinase; domain 1 43 106 - -
Pumo6g02702 242 FunFam Os07g0541700 protein 90 173 - -
Pumo6g02702 242 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Pumo6g02702 242 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 95 - -
Pumo6g02702 242 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02702 242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02702 Pumo-Chr6 64716720 64720215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02702 29 211 Receptor kinase-like Gene Family AT4G23280 57.923 4.10e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo6g02702 Pkinase 7.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02702 - - gmx:100798426 313.538