Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02696 ATGGTTCTCCAAACTTCATCTCTAGGGTTTACAGTGAGGAGGCACCCACCAGAGCTAGTAGCCCCAGATAACCCCACTCCCCATGAAGTTAAGCTACTATCTGACATAGATGACCAAAATGGCCTGCGTTACCAGCTTCCACTGGTGCAATTCTTTCCTTACCAGCCTTCAATGGAAGGGAAAGACCCTGTTGAAGTCATTAGAGAAGCACTCTCCAAAACACTTGTGTTTTACTATCCCTTAGCGGGGAGGCTTAGGGAGGGTCCTGATGGCAATCTAATGGTGGATTGTAATGGAGAAGGTGTCATGTTCATTGAAGCTGATGCAGATGTGACAATTGAGCAGTTTGGTAACAATTTTATGCCTCCATTCCCTTGCTTTGATGAGCTCTTATATAATGTTCCTGGCTCAGATGGAATGATTGACTCTCCACTCCTGCTTATACAGGTGACACGTCTCAAGTGTGGTGGTTTCATCTTTGCTCTCCGCATGAATCATGTTATGTGTGATGGAAGTGGAATTTGCCAATTTCTGAAGGCCTTATCAGAGATAGCACACGGTGCACCAAAACCTTCTATTCTCCCTGTGTGGCATAGGGAATTTCTATGTGCAAGAGACCCACCAAAAGTTACATGCATCCATCATGAATACCAACAACTACCACCTGATTCAAGAAGCATCTTCATACCACATCATCGTTCCTTCTTCTTTGGCCCCAAAGAGATAGCTTCACTCCGTGCTCTTCTTCCCCACCACCTTGCCACCAAATCCACCTCCTTTGAAGTCATCACAGCATGCCTCTGGCGTTGCCGCACAGCATCACTAAAATGGCAGAACCCTAATCAAGAGGTTCGCTTGTTGTGCATTGTCAATGCACGCTTTGGAAACTGTAGGTTCAACCCACCATTGCCTAATGGGTTTTACGGCAACGCTTTTGTGTTTCCAGCGGCGGTTACCACTTCCAAAGATCTCCGGCAATTTTTAAACGAATGTAGAAGAAAGAATCTCTTGAGAAATAAAGAGAATGGACCAATGGATAATGACCATCCGGAACTGAACAGAAAAGACAAGCCAAGTTTTGATCTAGAGGATAGGGAGGGGTTTAGGGAACTTTGTGGGGGGAGTGAGCCATACGGAGGGGTCACAAAATGGCCTAATAGTATGCCTTGGGGCAATGGGGCAGAAGTAGAAGAGGGGCTTGTTAAGAGTGACATGCACTGCGAAGCACCAACACGTCAAGATTTGGGCTCTAAACCTGAGTGGGAATTTCATATTGCAAATGACACCACTAAATAG 1296 0.4576 MVLQTSSLGFTVRRHPPELVAPDNPTPHEVKLLSDIDDQNGLRYQLPLVQFFPYQPSMEGKDPVEVIREALSKTLVFYYPLAGRLREGPDGNLMVDCNGEGVMFIEADADVTIEQFGNNFMPPFPCFDELLYNVPGSDGMIDSPLLLIQVTRLKCGGFIFALRMNHVMCDGSGICQFLKALSEIAHGAPKPSILPVWHREFLCARDPPKVTCIHHEYQQLPPDSRSIFIPHHRSFFFGPKEIASLRALLPHHLATKSTSFEVITACLWRCRTASLKWQNPNQEVRLLCIVNARFGNCRFNPPLPNGFYGNAFVFPAAVTTSKDLRQFLNECRRKNLLRNKENGPMDNDHPELNRKDKPSFDLEDREGFRELCGGSEPYGGVTKWPNSMPWGNGAEVEEGLVKSDMHCEAPTRQDLGSKPEWEFHIANDTTK 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02696 431 Gene3D - 231 370 IPR023213 -
Pumo6g02696 431 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 328 - -
Pumo6g02696 431 Pfam Transferase family 18 326 - -
Pumo6g02696 431 Gene3D - 8 219 IPR023213 -
Pumo6g02696 431 MobiDBLite consensus disorder prediction 409 431 - -
Pumo6g02696 431 MobiDBLite consensus disorder prediction 338 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02696 Pumo-Chr6 64420303 64426378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02696 43 324 Monolignol Biosynthesis Gene Families AT5G48930 32.542 6.59e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02696 K19861 - gmx:100795237 642.884