Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02681 ATGATCAGTATTAACAAAATCATTGAGAGGTATCGCCAATGTCGTTACAGCAAGTCACAGATTGGCGATTCATCGGAGCTCGAATCACAGAGTTCATACCATGAATTCTTGAAATTAAGAGCGAAATATGAATCTCTTGAGCGGACACAAAGGCATTTTCAAGGAGAAGAACTTGAGCCACTTAGCTTTAAAGATTTGCAGAGCCTTGAGAGACAACTAGACATAACGCTCGCACTAACTCGACAGCAACAAACGAAGAAACTCATGGCACGAGCAGATGAATTACGCGAAAAGGTGCACAAGTTGGAGGATCTTAACAAACAATTGGAGTCCAAGGAAAAAGATGAATTCTCAAGTCTCATCCTTGACAATAACAATTACATTCAATTGCATGCTACACAAGCTGATCAATTTGAACCTGGGACAACACTAAACACATGTAGGTTTCAGCACCAAGAAGTTGTTTCAAAGGAAAAAGCAATTGATACCAGGACAGATGGTAGTCAAAGCAATCACAACAAAAACAATGGATGGCTGTAG 540 0.4 MISINKIIERYRQCRYSKSQIGDSSELESQSSYHEFLKLRAKYESLERTQRHFQGEELEPLSFKDLQSLERQLDITLALTRQQQTKKLMARADELREKVHKLEDLNKQLESKEKDEFSSLILDNNNYIQLHATQADQFEPGTTLNTCRFQHQEVVSKEKAIDTRTDGSQSNHNKNNGWL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02681 179 ProSiteProfiles K-box domain profile. 29 120 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pumo6g02681 179 Coils Coil 85 115 - -
Pumo6g02681 179 Pfam K-box region 26 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pumo6g02681 179 MobiDBLite consensus disorder prediction 158 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02681 Pumo-Chr6 64066573 64086380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02681 2 112 MADS-box Gene Family AT2G45650 44.144 8.59e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02681 K09264 - gmx:100793681 317.39