Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02676 ATGGGTAAGGAGTGGTATTTTGCTGGAAGATCATCTAAGAGAGGTGGAGTAGGAGGAGGTGAAGGTGAAACACAAGCACCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCTTTTCACTTTCCCAACATAAACCAACACCAACAAGAACAAACCACTTTCAAGCCACCCTCATGCACCTCAGAAGACCATAGCACAGTCTCAAAAGGTTCTGAAGCACCTAGGAACAGCTTGGAGTCAGAGGATGGTGATGGTCCAATTTCATCTCTCTCATCAAAAGAAGAAGATTTTAAAATTCCTACGAATATTATACAAATCAAGACAAGTGGAGGCACAAGAACAAGTGGTGGAAATTTGAATGACTTGTCCTCAGAACTCACCAGCTCTCCAGGGACAAAGACACCAACTTTGGTGGCCAGGTTAATGGGTTTGGATCTTCTTCCAGGTGCACACTCACCCTCCTTTTCTTCTTCTTCATGTCTTTCCACTCCAAACACACAAGGCAATGTGCCACATCTGCAACACCACCTGAGGCACAAGCAACATGTCCAAACCAAACACAGAAACAGCATAGACAGTAGTGACATTGCAACCACAAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATCATCACCACAGACTCTCACTCCAAATCAACAAGGAAAACATGAACCTTGGTGAGGATTTGGAGCTCCCCAGGCTCTCATTTTCCAAAAGGAAGAGTGATGAGAACAGTGGCAGGAGTCCAAGCCATTATGCCAGGCAAATTGTCAAACAGGTTAAGGAAAGTGTGGGCAGAAAAGTTGGGCAAGACATCACCAACACTCTCAAAACAAGAGAAGAAAATATGGTAGGCCAATTCAGAAGCAAAAAATCTCCCAAAACATCATCACTGAAAGCAATTGATGAAACTGAAACCAGCCCAAATAAACAGTACTCAAACCCATCTTCCTATTCCCCAAGGCTTAGATTCATTGACAAACACAAACCAAGCACCACAACAACAACACCATCACCACTCACCCCAAAAGATCAAAACATGATGAAACTACCACCACCTCCTCCTCCAGTTAACACTCATCAACCTCAGCTTCCAAGAGTTTTAACCAAACCAAAGCCTCAAGCAGTGGTGCCAGAGCAGCAAGAGTTTCACCAGAACAACAAATCTGTACCAAAATGCAAAAAGGCTACCAATGAAAAGTTCAACTCAAGGCTCAAAAGGCCTCCACAGACATCAGACATCATCAGAAACAAGCAAGAAGAACCATTCATCATTCGTCCCACATCGCCTACTAGAGCCAATGACATCAAAACCACCAAAAGCAAGAAAACTCATCCATTGCCAAGCAATCTCCTCAACAACAATGTACCAAATCTTCTACCTGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTTCCAAACAGTCACAGGTCTGTGATAATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAGCCAGAGGTACAAACAAGAAGGACCAAGCACACTCGCCACCCGAGAAAGATCAGAGAACAAACCTAACGGTGCCTCCTCCACCATGTCCATCGGAGCCCAACCTCACACTCACACCCCAGAAGAACTTCAGTACATCACAGCAATCCTAGCCCGTACCACTTCCCTAGACCTACAGGGTACCCCCACAACAGTGTCCTTCAACCAGTGGTGGTTCTCTCCGACCCACCCACTTGACCCATCAATCTTCCACCACCTCGAACACCCCAACAACGACAAAGATCGCAACTTTACCCCAAAAGACCAACTGGGTCACCGTTGGAATCGGAAGTTACTGTTCGATTTGGTGGATGAGGTTCTGAGGGAGGTTTTGGGGCCAGAGAGAGAAAAGAGGCTTTGGTTTTTGAAGGGCACTGTTGGTTATTGCCAATGGGGGAGCGTTGAAGGGTTGGTGGAGAGGGTGTGGAAGAGGGTTGAGGAGTTCCCACGTGCGAAATGTGAGGTGTTGGAGGACATTGATGAGTTGATTGACATGCAGAGAGAGAAAGATGGTGAGGGATTGGAGGAAGAAGGGGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAGACGGTTATGGTTTTGGATTGTTGGGGAAATGCAAAAAAAGAAAAATTATTTTATGATTCAAATATATCACATGTTTGTACGATCAATTTTAACATGATACATAATTGA 2268 0.4511 MGKEWYFAGRSSKRGGVGGGEGETQAPSGCMCAVFQFFDFHPFHFPNINQHQQEQTTFKPPSCTSEDHSTVSKGSEAPRNSLESEDGDGPISSLSSKEEDFKIPTNIIQIKTSGGTRTSGGNLNDLSSELTSSPGTKTPTLVARLMGLDLLPGAHSPSFSSSSCLSTPNTQGNVPHLQHHLRHKQHVQTKHRNSIDSSDIATTRSLPETPRISSARRSDVDHHHRLSLQINKENMNLGEDLELPRLSFSKRKSDENSGRSPSHYARQIVKQVKESVGRKVGQDITNTLKTREENMVGQFRSKKSPKTSSLKAIDETETSPNKQYSNPSSYSPRLRFIDKHKPSTTTTTPSPLTPKDQNMMKLPPPPPPVNTHQPQLPRVLTKPKPQAVVPEQQEFHQNNKSVPKCKKATNEKFNSRLKRPPQTSDIIRNKQEEPFIIRPTSPTRANDIKTTKSKKTHPLPSNLLNNNVPNLLPVKTDPSPPATKIPSKQSQVCDNSQESKSSSQLSSCSRQSQRYKQEGPSTLATRERSENKPNGASSTMSIGAQPHTHTPEELQYITAILARTTSLDLQGTPTTVSFNQWWFSPTHPLDPSIFHHLEHPNNDKDRNFTPKDQLGHRWNRKLLFDLVDEVLREVLGPEREKRLWFLKGTVGYCQWGSVEGLVERVWKRVEEFPRAKCEVLEDIDELIDMQREKDGEGLEEEGEGLVAEIEGNIWDTLVHETVMVLDCWGNAKKEKLFYDSNISHVCTINFNMIHN 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02676 755 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 728 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 156 223 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 156 176 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 415 429 - -
Pumo6g02676 755 Pfam DUF761-associated sequence motif 127 156 IPR032795 -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 287 361 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 455 473 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 341 355 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 98 138 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 287 332 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 482 550 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 52 138 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 412 550 - -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 52 78 - -
Pumo6g02676 755 Pfam Domain of unknown function (DUF4378) 553 720 IPR025486 -
Pumo6g02676 755 MobiDBLite consensus disorder prediction 194 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02676 Pumo-Chr6 64012483 64016884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02676 108 728 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.783 2.24e-63 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02676 - - gmx:100795947 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02676 6 64012483 64016884 Pumo6g02676 6 64012483 64016884 ECH
Pumo6g02676 6 64012483 64016884 Pumo3g00880 3 13715520 13718559 PCT