Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02643 ATGCCCCCTATGACACCTTCGCGAGTGGCAGGTGGGTTAACTCAATCATCATCAAATTCTGGAATTTTCTATCAAGGAGATGGGCAGTCACAGAATGTAGTTAATTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGCACGGTTCCAGGAGCTGGTCGTTCAAACCTGGGTCCAGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCCGCACCTAGTGTTGGGGCCAGTTCTTTAGTCACTGATGCAAATTCTGCACTCTCTGGTGGCCCACATTTGCAGAGAAGTACCAGTGTTAACACAGACTCATACTTACGATTACCTGCCTCACCTATGTCATTTACATCAAATAATATTAGTATTTCTGGGTCATCAGTGATGGATGTTTCCTCTGTGGTACAACAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGCTGCAGGGTGCTTCAAGTGCTACGTCTTTGCCTGCATCTCAAACTGGCCCTTCTGCACTCCAAATGGGTGCACAAGTCCCAGGATCTTTCATTCAAGATCCAAATATGTCTCATCTGTCAAAGAAACCTAGACTGGATATCAAACAGGAGGATATAATGCAACAGCAGCGTCCATATGACAGTGGTGTTAGTGGAGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGACAACGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGCTCAAAGAAACGGTGGTGTTTGTCATTATATAGCAACGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCATCTATGGATGCATGGCACTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTATTACCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTAATTGATGAACTATTGTTTCTGGACTTGCCACGTGAAATGAGATTCCCTTCTGGTGCAATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGTATCATATTCACTCAAGACTTGAAGATCTTATCCTGGGAGTTCTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAGTTAGTTCAGGTAGCTAAAAAATGCCAAAGTACAATTGCTGAAAGTGGGTCAGATGGGGTTTCTCAACAAGACATACAAACAAACAGCAACATGTTGTTGACAGCTGGGGGTCAGCTTGCGAAGATTTTGGAGATGCAATCGCTAAATGAGTTGGGCTTTTCTAAAAGATATGTGAGATGTTTGCAGATTTCGGAGGTTGTCAATAGCATGAAAGACTTAATAGATATCTGTGCTGAGCACAATATTGGGGCAATTGAGAGCTTGAAAAATTATCCTCGACTTGCAACAGCCTCAAAGCACCAGATGCAAAAGATGCAGGAAATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACCGATCGAAACACACTCAATAAGCTAATGGCTATGAATCCTGGATTAAATAACCATATAAACAACACTCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTTTAGCACTGACCAACTACCAGAATCTTCTCATGAGGCAAAATTCAATGAATTCTAGCCATGGCTCACTTCAGCGAGAAGGGTCTTTCAATAATTCAAACCAGAGTCCCTCTTCTGCTTTGCAAGGAGCTGGTCCTGCTTTAATTCCAAGCTCAATGCAGAATTCATCTGTTAGTGGTTTCCCAAGTCCCCATCTGCCCCACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACACCACCTACAACAGCGCTCATTAA 1926 0.4309 MPPMTPSRVAGGLTQSSSNSGIFYQGDGQSQNVVNSHLSSSFVNSSSTVPGAGRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSTSVNTDSYLRLPASPMSFTSNNISISGSSVMDVSSVVQQSSHQDQNVQQLQQNQQQLQGASSATSLPASQTGPSALQMGAQVPGSFIQDPNMSHLSKKPRLDIKQEDIMQQQRPYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRSKKRWCLSLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPREMRFPSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNSNMLLTAGGQLAKILEMQSLNELGFSKRYVRCLQISEVVNSMKDLIDICAEHNIGAIESLKNYPRLATASKHQMQKMQEMEQLANVQGLPTDRNTLNKLMAMNPGLNNHINNTHNMVNRGALSGSAQAALALTNYQNLLMRQNSMNSSHGSLQREGSFNNSNQSPSSALQGAGPALIPSSMQNSSVSGFPSPHLPHNSSSSSSSSNNNTTYNSAH 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02643 641 MobiDBLite consensus disorder prediction 572 641 - -
Pumo6g02643 641 MobiDBLite consensus disorder prediction 9 28 - -
Pumo6g02643 641 MobiDBLite consensus disorder prediction 602 641 - -
Pumo6g02643 641 MobiDBLite consensus disorder prediction 136 179 - -
Pumo6g02643 641 MobiDBLite consensus disorder prediction 1 28 - -
Pumo6g02643 641 MobiDBLite consensus disorder prediction 572 596 - -
Pumo6g02643 641 PANTHER LIM DOMAIN-BINDING PROTEIN 45 637 IPR029005 -
Pumo6g02643 641 Pfam LIM-domain binding protein 227 487 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02643 Pumo-Chr6 63482833 63488938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02643 222 491 C2H2 Transcription Factor Family AT1G43850 59.630 1.75e-109 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02643 - - ccaj:109803720 913.294