Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02582 ATGCTCAAGTTTTACTTATCCGACTCCGAGTCCAAGCTTCTACTAACATCGTTAGAAGGAAACAACCCAGCTCAAGCCGCAGCTTCAAAACTCAACATCCCCCACGGCACGGCTTCGATAACTCAAGCCGAGAACAACGAAGCCGAGCTGAGCCTCTCGTTAAGCCACCCCGAGTCAGACTCTATTAACTCGGTTGAGTCACTCGTTAACGATCCTGCTGACGTGGCGCTTTTCCTTCACACCTCGGGCACCACGAGCCGTCCCAAGGGAGTGCCTTTGACACAACACAACTTGTTCTCTTCCGTGAACAACATTAAATCGGTGTACCGACTCACCGAGTCCGACTCGACGGTGATCGTGCTTCCGCTCTTCCACGTGCACGGTTTGATCGCGGCGTTGCTGAGTTCACTCGGCGCCGGCGCGGCGGTGGCGCTGCCGGCGGCGGGGAGGTTCTCGGCCTCGTCGTTCTGGAAGGACATGATCAAGTACAGCGCCACGTGGTACACCGCGGTTCCCACCATACACCAGATCATACTGGATCGCCACTCGAACAACCCCGAACCGGTTTACCCGCGGCTCCGGTTCATCCGAAGCTGCAGCGCGTCGCTGGCACCGGCTATTCTCGATAAACTCGAGGAGGCATTCAGTGCGCCCGTGTTGGAGGCTTATGCGATGACGGAAGCGTCGCATTTGATGGCTTCCAACCCTTTGCCGAAAGATGGGCCCCACAAGGCCGGGTCGGTTGGGAGGCCCGTGGGCCAGGAAATGGTTATTTTGGACGAAGCGGGTCGGGTTCAAGAGGATGAAGTTAGCGGAGAAGTTTGCATTCGGGGTTCTAATGTTACGAAGGGTTATAAAAATAACGTGGATGCCAATACGGCGGCGTTTCAGTTTGGTTGGTTTCACACCGGTGATGTTGGTTACTTGGATTCTGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGTGGAGGAGAAAAGATATCACCAATAGAAGTGGATGCTGTCCTTCTTTCACACCCAGACATTGCTCAGGCAGTTGCTTTCGGAGTGCCTGATCCCAAGTATGGGGAGGAGTGTTCCTTGCCACTGGTCTTGATGAAGCCAAATATTGTTTCTTTGCTTTTTAAGTTGTACATAGTTGCAAAAGGAGTACATGTGAAAGAATAA 1182 0.5321 MLKFYLSDSESKLLLTSLEGNNPAQAAASKLNIPHGTASITQAENNEAELSLSLSHPESDSINSVESLVNDPADVALFLHTSGTTSRPKGVPLTQHNLFSSVNNIKSVYRLTESDSTVIVLPLFHVHGLIAALLSSLGAGAAVALPAAGRFSASSFWKDMIKYSATWYTAVPTIHQIILDRHSNNPEPVYPRLRFIRSCSASLAPAILDKLEEAFSAPVLEAYAMTEASHLMASNPLPKDGPHKAGSVGRPVGQEMVILDEAGRVQEDEVSGEVCIRGSNVTKGYKNNVDANTAAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDPKYGEECSLPLVLMKPNIVSLLFKLYIVAKGVHVKE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02582 393 ProSitePatterns Putative AMP-binding domain signature. 78 89 IPR020845 -
Pumo6g02582 393 Gene3D - 322 388 IPR045851 -
Pumo6g02582 393 SUPERFAMILY Acetyl-CoA synthetase-like 2 376 - -
Pumo6g02582 393 Pfam AMP-binding enzyme 2 327 IPR000873 -
Pumo6g02582 393 PANTHER ACYL-COA SYNTHETASE 2 365 - -
Pumo6g02582 393 Gene3D - 1 320 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02582 Pumo-Chr6 61024711 61032392 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02582 31 374 Monolignol Biosynthesis Gene Families AT4G05160 31.429 1.07e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02582 K22133 - gmx:100779306 644.425