Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02581 ATGTGGATACATTGTGCTGTCATCCCAAGAGAAGGATCAGACATTGATGAGGCAGAGGTGCTAAGATATTGCAAGAAGAATCTTGCATCTTTCAAGGTCCCCAAAAAGGTCTTCCTTACTGATTCTTTGCCCAAGACAGCCACCGGAAAGATTTTGCGTCGTCTTGTGGCAGAACACTTTGTCTCTCAAAATTGA 195 0.4359 MWIHCAVIPREGSDIDEAEVLRYCKKNLASFKVPKKVFLTDSLPKTATGKILRRLVAEHFVSQN 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02581 64 Pfam AMP-binding enzyme C-terminal domain 3 50 IPR025110 -
Pumo6g02581 64 SUPERFAMILY Acetyl-CoA synthetase-like 3 62 - -
Pumo6g02581 64 Gene3D - 3 63 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02581 Pumo-Chr6 60834603 60835521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02581 5 64 Monolignol Biosynthesis Gene Families AT1G62940 35.000 5.18e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02581 K22133 - gmx:100779306 119.012