Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo6g02553 | ATGCCTTCATTGTGGTGGAAATCATCAAGAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATGCATTTCACCGAAAATTTAAAATCCCATCCGAAGGTAAACCAAGCAGTAGATCTGGAGGATCTCGTAGACATTGCAATGACTCAATTTCAGAGAAAGGGGCTCAGTCTCCTCCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGGAAGGTGTCAAAGCTTTGTTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGCCTGCACCCATCAAATATAAGCCGAGCAGATTCTGAAATTAGTATATCTAGACCAAGACTTGTAAAGGGCTCCAAACCATCATTGTTTCTTCCACTACCAAAACCAGCGTGCATGCGTGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCAGTGGACTCTCGCAATCGTAGTCCTCTGGCAACTGACTGTGAAACTGGGACTAGAACTGCTGCAGGCAGTCCCTCCAGCTTGATGCTCAAGGATCAATCATCTACTGTTGTTTCCCAAATAAATTCAAGAGAAGCCAAAAAACCGGCAAACATTCTGGGTAATCATACGTCTTCTACTTCACCAAAACGTAGGCCCTTAGGCAACCATGTTTCAAATCTGCAGATTCCTCCTCATGGTGCCTTCTGCAGTGCGCCTGACAGTTCCAGATCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGAACAGGTGTTGAACTCTGCTTTTTGGGCCGGAAAGCCATATTCAGAGGTCAATTTAGGTGGATCTGGGCACTGCTCGAGTCCCGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCTAGCAGGGGTAGCCCAGAATATTCCCCTGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTTACACCTATTCATCCAAGAGCTGGGGGAACACCCAATGAATCACAAACAGGAAGGGTTGATGATGTAAAACCACAGAGTCATCGTTTGCCCCTTCCTCCCTTAGCAGTTACCAATACTTTGCCTTTCTCTCATTCAAATTCTGCAGCAACTTCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATTAGCCCTGGATCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACATGTCTATGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTGACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTGTTGAGCCGGTTACGACATCCAAATATTGTGCAGTATCATGGTTCTGAAACAGTAGGCGACAAGCTTTACATATATCTGGAGTATGTCGCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATACTAATTGCCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCATGTCCATTATCATTAAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTATAAAAAACTCTAATGGTTGCAACCTAGCTGTTGATATATGGAGCCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGATTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCATCTCTCTAGTGAAGGAAAGGATTTTGTTAGGAAATGCTTACAACGTAATCCACTCAATCGCCCTTCAGCCAGTGAATTATTGGAGCACCCTTTTGTAAAATGTGCTGCACCTTTAGAAAGACCTATTCTGGGTCCTGATGCTTCTTCAGACCCAGCAGTATCTGGGATCACACAAGGAGCTACAGCTCTGGGCATTGGACAAGGAAGGAATCCATCTGTGTTGGATTCAGATCGACTTTCTCTTCATTCTTCTAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCGCCGCAACACATGAATGGGAGAATGTCTCCCTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCAATGGTGGTAGTGGTGCCATTCCATTTAGTAATCACTTAGTTTACATTCAAGAGGGTCTTGGAAACTTGCCAAAGTCTCCAAATGGTGTCTACGTTAGTGGCCCTGCTCATCATGACTTAAATGTTGACATTTTTCGAGGAATGCAACAGACATCTCATATTACATCAGAACTGGTTCCAAGCGAAAGTGATGTTCTGGGGAAACAGTTTGCACGGACTCCTCCTCATAATGAGCCGTATGATGTTCAATCAGTCTTGGCTGACCGAGTTTGCCGGCAGCTGCTGGGGGATAATGTGAAAATTAACCCATCCCTTGATCTAAGTCCCAACTCCTTGCTCAGCCGGGCTAATGGCTCAGGCTTGTGGAGTTCAGAGCCTTTCCAGGTGAAGTGCCAAACTAAGCCATAG | 2667 | 0.4462 | MPSLWWKSSRETKKKANKESFINAFHRKFKIPSEGKPSSRSGGSRRHCNDSISEKGAQSPPESRSPSPSKVGRCQSFVERPHAQPLPLPGLHPSNISRADSEISISRPRLVKGSKPSLFLPLPKPACMRVSSESSADSDEPVDSRNRSPLATDCETGTRTAAGSPSSLMLKDQSSTVVSQINSREAKKPANILGNHTSSTSPKRRPLGNHVSNLQIPPHGAFCSAPDSSRSSPSRSPLRAFGTEQVLNSAFWAGKPYSEVNLGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPNESQTGRVDDVKPQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVYVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYHGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTQQILSGLAYLHAKNTVHRDIKGANILVDTNCRVKLADFGMAKHITGQSCPLSLKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGIAAMFKIGNSKELPTIPDHLSSEGKDFVRKCLQRNPLNRPSASELLEHPFVKCAAPLERPILGPDASSDPAVSGITQGATALGIGQGRNPSVLDSDRLSLHSSSEIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGNLPKSPNGVYVSGPAHHDLNVDIFRGMQQTSHITSELVPSESDVLGKQFARTPPHNEPYDVQSVLADRVCRQLLGDNVKINPSLDLSPNSLLSRANGSGLWSSEPFQVKCQTKP | 888 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 722 | 756 | - | - | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 149 | 208 | - | - | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 264 | 396 | - | - | |
Pumo6g02553 | 888 | ProSiteProfiles | Protein kinase domain profile. | 394 | 650 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 720 | 756 | - | - | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 264 | 296 | - | - | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 53 | 72 | - | - | |
Pumo6g02553 | 888 | SMART | serkin_6 | 394 | 650 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g02553 | 888 | FunFam | Mitogen-activated protein kinase kinase kinase | 392 | 673 | - | - | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 28 | 52 | - | - | |
Pumo6g02553 | 888 | SUPERFAMILY | Protein kinase-like (PK-like) | 392 | 729 | IPR011009 | - | |
Pumo6g02553 | 888 | Gene3D | Transferase(Phosphotransferase) domain 1 | 392 | 662 | - | - | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 28 | 238 | - | - | |
Pumo6g02553 | 888 | Pfam | Protein kinase domain | 395 | 650 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g02553 | 888 | MobiDBLite | consensus disorder prediction | 361 | 380 | - | - | |
Pumo6g02553 | 888 | ProSitePatterns | Protein kinases ATP-binding region signature. | 400 | 423 | IPR017441 | GO:0005524 | |
Pumo6g02553 | 888 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 57 | 663 | - | - | |
Pumo6g02553 | 888 | CDD | STKc_MEKK1_plant | 393 | 650 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo6g02553 | Pumo-Chr6 | 59719232 | 59725187 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo6g02553 | 5 | 862 | MAP Kinase Kinase Kinase | AT1G63700 | 58.426 | 0.0 | 883 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Pumo6g02553 | Pkinase | 1.1e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo6g02553 | K20717 | - | gmx:100792783 | 1555.42 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo6g02553 | 6 | 59719232 | 59725187 | Pumo6g02553 | 6 | 59719232 | 59725187 | ECH |