Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02553 ATGCCTTCATTGTGGTGGAAATCATCAAGAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATGCATTTCACCGAAAATTTAAAATCCCATCCGAAGGTAAACCAAGCAGTAGATCTGGAGGATCTCGTAGACATTGCAATGACTCAATTTCAGAGAAAGGGGCTCAGTCTCCTCCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGGAAGGTGTCAAAGCTTTGTTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGCCTGCACCCATCAAATATAAGCCGAGCAGATTCTGAAATTAGTATATCTAGACCAAGACTTGTAAAGGGCTCCAAACCATCATTGTTTCTTCCACTACCAAAACCAGCGTGCATGCGTGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCAGTGGACTCTCGCAATCGTAGTCCTCTGGCAACTGACTGTGAAACTGGGACTAGAACTGCTGCAGGCAGTCCCTCCAGCTTGATGCTCAAGGATCAATCATCTACTGTTGTTTCCCAAATAAATTCAAGAGAAGCCAAAAAACCGGCAAACATTCTGGGTAATCATACGTCTTCTACTTCACCAAAACGTAGGCCCTTAGGCAACCATGTTTCAAATCTGCAGATTCCTCCTCATGGTGCCTTCTGCAGTGCGCCTGACAGTTCCAGATCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGAACAGGTGTTGAACTCTGCTTTTTGGGCCGGAAAGCCATATTCAGAGGTCAATTTAGGTGGATCTGGGCACTGCTCGAGTCCCGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCTAGCAGGGGTAGCCCAGAATATTCCCCTGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTTACACCTATTCATCCAAGAGCTGGGGGAACACCCAATGAATCACAAACAGGAAGGGTTGATGATGTAAAACCACAGAGTCATCGTTTGCCCCTTCCTCCCTTAGCAGTTACCAATACTTTGCCTTTCTCTCATTCAAATTCTGCAGCAACTTCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATTAGCCCTGGATCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACATGTCTATGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTGACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTGTTGAGCCGGTTACGACATCCAAATATTGTGCAGTATCATGGTTCTGAAACAGTAGGCGACAAGCTTTACATATATCTGGAGTATGTCGCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATACTAATTGCCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCATGTCCATTATCATTAAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTATAAAAAACTCTAATGGTTGCAACCTAGCTGTTGATATATGGAGCCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGATTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCATCTCTCTAGTGAAGGAAAGGATTTTGTTAGGAAATGCTTACAACGTAATCCACTCAATCGCCCTTCAGCCAGTGAATTATTGGAGCACCCTTTTGTAAAATGTGCTGCACCTTTAGAAAGACCTATTCTGGGTCCTGATGCTTCTTCAGACCCAGCAGTATCTGGGATCACACAAGGAGCTACAGCTCTGGGCATTGGACAAGGAAGGAATCCATCTGTGTTGGATTCAGATCGACTTTCTCTTCATTCTTCTAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCGCCGCAACACATGAATGGGAGAATGTCTCCCTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCAATGGTGGTAGTGGTGCCATTCCATTTAGTAATCACTTAGTTTACATTCAAGAGGGTCTTGGAAACTTGCCAAAGTCTCCAAATGGTGTCTACGTTAGTGGCCCTGCTCATCATGACTTAAATGTTGACATTTTTCGAGGAATGCAACAGACATCTCATATTACATCAGAACTGGTTCCAAGCGAAAGTGATGTTCTGGGGAAACAGTTTGCACGGACTCCTCCTCATAATGAGCCGTATGATGTTCAATCAGTCTTGGCTGACCGAGTTTGCCGGCAGCTGCTGGGGGATAATGTGAAAATTAACCCATCCCTTGATCTAAGTCCCAACTCCTTGCTCAGCCGGGCTAATGGCTCAGGCTTGTGGAGTTCAGAGCCTTTCCAGGTGAAGTGCCAAACTAAGCCATAG 2667 0.4462 MPSLWWKSSRETKKKANKESFINAFHRKFKIPSEGKPSSRSGGSRRHCNDSISEKGAQSPPESRSPSPSKVGRCQSFVERPHAQPLPLPGLHPSNISRADSEISISRPRLVKGSKPSLFLPLPKPACMRVSSESSADSDEPVDSRNRSPLATDCETGTRTAAGSPSSLMLKDQSSTVVSQINSREAKKPANILGNHTSSTSPKRRPLGNHVSNLQIPPHGAFCSAPDSSRSSPSRSPLRAFGTEQVLNSAFWAGKPYSEVNLGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPNESQTGRVDDVKPQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVYVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYHGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTQQILSGLAYLHAKNTVHRDIKGANILVDTNCRVKLADFGMAKHITGQSCPLSLKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGIAAMFKIGNSKELPTIPDHLSSEGKDFVRKCLQRNPLNRPSASELLEHPFVKCAAPLERPILGPDASSDPAVSGITQGATALGIGQGRNPSVLDSDRLSLHSSSEIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGNLPKSPNGVYVSGPAHHDLNVDIFRGMQQTSHITSELVPSESDVLGKQFARTPPHNEPYDVQSVLADRVCRQLLGDNVKINPSLDLSPNSLLSRANGSGLWSSEPFQVKCQTKP 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02553 888 MobiDBLite consensus disorder prediction 722 756 - -
Pumo6g02553 888 MobiDBLite consensus disorder prediction 149 208 - -
Pumo6g02553 888 MobiDBLite consensus disorder prediction 264 396 - -
Pumo6g02553 888 ProSiteProfiles Protein kinase domain profile. 394 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02553 888 MobiDBLite consensus disorder prediction 720 756 - -
Pumo6g02553 888 MobiDBLite consensus disorder prediction 264 296 - -
Pumo6g02553 888 MobiDBLite consensus disorder prediction 53 72 - -
Pumo6g02553 888 SMART serkin_6 394 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02553 888 FunFam Mitogen-activated protein kinase kinase kinase 392 673 - -
Pumo6g02553 888 MobiDBLite consensus disorder prediction 28 52 - -
Pumo6g02553 888 SUPERFAMILY Protein kinase-like (PK-like) 392 729 IPR011009 -
Pumo6g02553 888 Gene3D Transferase(Phosphotransferase) domain 1 392 662 - -
Pumo6g02553 888 MobiDBLite consensus disorder prediction 28 238 - -
Pumo6g02553 888 Pfam Protein kinase domain 395 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02553 888 MobiDBLite consensus disorder prediction 361 380 - -
Pumo6g02553 888 ProSitePatterns Protein kinases ATP-binding region signature. 400 423 IPR017441 GO:0005524
Pumo6g02553 888 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 57 663 - -
Pumo6g02553 888 CDD STKc_MEKK1_plant 393 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02553 Pumo-Chr6 59719232 59725187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02553 5 862 MAP Kinase Kinase Kinase AT1G63700 58.426 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo6g02553 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02553 K20717 - gmx:100792783 1555.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02553 6 59719232 59725187 Pumo6g02553 6 59719232 59725187 ECH