Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02537 ATGCGATTCTACAAAAAGCACAACCTTTTAACTGTTTTTTCTTTCTTGATTGTTTGTTCCTTATTTTCTTCGGTGAATCCTAAAATGTCATCGCCGGGGTTCACTGGCGGAGGTGGGGCGTCGGAGTTTTTCACCGGAGCCGGTGGTTTTTCCGGCAGATCCATCCCGGCGGCCACCATGAACAACCCCAACGCCGCCGCCTCCGCCACCACCAACCTCCACCCTCTTTACCGAGCCCAACAACAACAGAATCTCCCCGCAATGTTTCTAGATCCTTCCTCGCAGATCGCTCAACGCCAAACACCAACCCTAATCGGCAAACGCACCCTAACCGAATTCCAAACCTACAACCAAACCAACAACAACAACCACCCCAACCACGTCCTCTCGAACCTCCTGCTTCGTTCCGTTAAGTCCCGAACCAGTTTTCCTCACAGCTCCATGGACTTTCCCGTTCCCGAATTGCAAAACCTGCAGAACCTGCAAAACCAAAACCTTTATGCCAACCAAACGCAGCGTTTTGGCGTTCCGTTACTTCACCAGCTCCGTCCTCAGCCCATTAACCTCCCCAACAACGGGCCAGTTCCCATGACAGGCCCAAATTTCGGTTACCGGAACTCCAATTTGGGCTTACAACAGAACCGGGTTCGTGTCTCTCTTCCTGTTCCTGTTCCGGTTCAGGTTCAGTCGTCTGAACCGGAAAAGAAGATCATGGACCACCGGCTTCTGGAATTGGAGAAGCAGCTTCTGGAAGATAACGACGAAGAAGGAGAAGCCGATGCTGCGTCTGTGATAACCACGAGCGAGTGGTCCGAGACTTATCAGAATTTAATCAGCCCCGGTCCGGTTCAGAAACCAGTTTTGACGACGTCGCCGACTTCGTCGACGACGTCGTCCACGTCATCATCTTCCTCCGTGGCCTCGCCTGCTTCCGGATGCTCGAAGCAGACGCTCATGGAAGCCGCATCTGCAATTGTTGAAGGAAAGCTTGACGTTGCAACGGAGATCCTGAACCGGCTGAACGGACCGAACCGGAACGATAGGTTGACGGATTGCATGGTTTCGGCGTTGAAATCGAGGATGAATCCGGCGGAGTATCCGCCGCCGGTGGCGGAGCTTTTCAGCAAGGAACACGCCGAGTCGACTCAGCTGCTTCTGGAGAACTCGGTGTGCTTCATGGCAGGGTTCACGGCGGCGAATCTCGCGATTTTGGAAGCCGCATTTGAGGAGAAGACGGAGAAGAGCAGGTTCTGCGTGGTGGATTTTGAGATTGGACAGGGGAAGCAGTATTTGCTCCTTCTCAAGGCGCTCTCCGCGCGTAACCAGAACGCGGCGGTGAAGATCGCGGCCGTGGCGGAGAACGGCGGCGAGGAGAGAGTGCGCGCCGTCGGAGAAATGCTGAGTCGACTCGCGGAGAGGCTGATGATCGGGTTCGAGTTTAAAATCGTCGCGACTCAGAAAATCGCCGAGTTGACTCGCGAGTCGCTGGGCTGCGACGCTGACGAGGTTCTCGTGGTGAACTTCGCATTCAAGTTGAACAAGATTCCCGACGAGAGCGTCTCCACGGAGAACCCGCGCGACGAGCTCTTACGGCGCGTGAAGCGACTCGCGCCGCGCGTGGTGACCATCGTGGAGCAGGACATGAACGCGAACACGGCGCCTTTTTTGGCGCGCGTGGCGGAAACGCTGTCGTATTATGGCGCGTTGTTGGAGTCGATTGAGGCCACCACGGCGGGGAGGGAAAATTATAACAGCAGCAGCAACAACGCGGACCGAGTCAAACTCGAGGAGGGACTGAGTCGCAAATTGCATAACTCGGTGGCGTGCGAGGGAAGAGATCGCGTGGAACGGTGCGAAGTGTTTGGAAAATGGCGCGCGCGTATGAGCATGGCGGGGTTCGAGTTAAAACCACTGAGTCAAAGCATGGCCGAGTCAATAAAATCGCTACTCACCTCAGCCAACAACCGAGTCAACTCGGGACTCAGCGTGAAGGAAGAGAACGGAGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACAGTCGCATCCGCTTGGCGTTAA 2061 0.5512 MRFYKKHNLLTVFSFLIVCSLFSSVNPKMSSPGFTGGGGASEFFTGAGGFSGRSIPAATMNNPNAAASATTNLHPLYRAQQQQNLPAMFLDPSSQIAQRQTPTLIGKRTLTEFQTYNQTNNNNHPNHVLSNLLLRSVKSRTSFPHSSMDFPVPELQNLQNLQNQNLYANQTQRFGVPLLHQLRPQPINLPNNGPVPMTGPNFGYRNSNLGLQQNRVRVSLPVPVPVQVQSSEPEKKIMDHRLLELEKQLLEDNDEEGEADAASVITTSEWSETYQNLISPGPVQKPVLTTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASAIVEGKLDVATEILNRLNGPNRNDRLTDCMVSALKSRMNPAEYPPPVAELFSKEHAESTQLLLENSVCFMAGFTAANLAILEAAFEEKTEKSRFCVVDFEIGQGKQYLLLLKALSARNQNAAVKIAAVAENGGEERVRAVGEMLSRLAERLMIGFEFKIVATQKIAELTRESLGCDADEVLVVNFAFKLNKIPDESVSTENPRDELLRRVKRLAPRVVTIVEQDMNANTAPFLARVAETLSYYGALLESIEATTAGRENYNSSSNNADRVKLEEGLSRKLHNSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQSMAESIKSLLTSANNRVNSGLSVKEENGGICFGWMGRTLTVASAWR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02537 686 MobiDBLite consensus disorder prediction 277 311 - -
Pumo6g02537 686 Pfam GRAS domain family 315 686 IPR005202 -
Pumo6g02537 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 284 676 IPR005202 -
Pumo6g02537 686 ProSiteProfiles GRAS family profile. 297 686 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02537 Pumo-Chr6 59336465 59339165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02537 77 686 GRAS Transcription Factor Family AT5G52510 48.270 1.06e-157 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo6g02537 GRAS 2e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02537 - - gmx:100808172 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02537 6 59336465 59339165 Pumo6g02537 6 59336465 59339165 ECH