Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02456 ATGGAATTTTGTTGTTCTGAGAATAGTAGTAATTCAAGAGTTTTGTGTCAGAATCCAGGGACTATACCCCCCAACATTTCTCAAGCTGAGGCTGCTTGGTTACAATCCTTCTACACAGAGACGGAGCAAAACAAGCATGTCATCGCAGTTGCTGCTGCCACGGCTGCAGCTGTTGATGCCGCCGTGGCAGCAGCACAGGCTGTGGTGGCGGTTGTTAGGCTCACCAGCCAAGGAAGGGGTGGCACCATGTTTGGTATTGGACCTGAGATGTGGGCGGCCATCAAGATTCAAACAGTATTTAGAGGATACCTGGCAAGGAAGGCACTCAGGGCTTTAAAAGGATTGGTGAAGTTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAGCAGCAACCTTGCATAGTATGCAGGCTCTTGAGAGATTTGATGACACTAAGAGTGAGTGTGCAGTTCCAATCCACAGTAGAAGGGTATCATCTTCTTTTGATGCTACAATTAACAACAACAACAACAACAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGATACTTTCAGGCCTAAGTCAAGGTCTAGAAGGACAATATCAGATTTTGGTGATGAACCATCATTTCAAGCACTTTCTTCTCCCTTACCAGCTCCATACAGAACCCCTACACGTTTGTCCATGCTAGACCAAAGGAATTTTCAGGACTCTGAATGGGGGTTAACAGGAGAAGAGTGCAGATTCTCTACAGCACAAAGCACTCCTCGCTTCACAAATTCTTGTAGCTGTGGCTCAGTTGCACCTATGACACCGAAGAGTGTGTGCACTGATAACTTGTTCCTAAAGCAGTATGGGAATTTTCCAAAATACATGGCCAGTACTGAGTCTTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGGCCAGAACCTGGTCCAAGGAAGAGGATTTCCCTCAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGGGTTAGAATGCAGAGGTCTTGCTCACAGGTTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGGAAGCTTCAGAAATCCACATAA 1083 0.4589 MEFCCSENSSNSRVLCQNPGTIPPNISQAEAAWLQSFYTETEQNKHVIAVAAATAAAVDAAVAAAQAVVAVVRLTSQGRGGTMFGIGPEMWAAIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALERFDDTKSECAVPIHSRRVSSSFDATINNNNNNNSVDGSPKIVEVDTFRPKSRSRRTISDFGDEPSFQALSSPLPAPYRTPTRLSMLDQRNFQDSEWGLTGEECRFSTAQSTPRFTNSCSCGSVAPMTPKSVCTDNLFLKQYGNFPKYMASTESFKAKLRSHSAPKQRPEPGPRKRISLNEMMESRSSLSGVRMQRSCSQVQEVINFKNAVMGKLQKST 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02456 360 MobiDBLite consensus disorder prediction 297 316 - -
Pumo6g02456 360 Gene3D - 89 141 - -
Pumo6g02456 360 PANTHER IQ-DOMAIN 5-RELATED 31 331 - -
Pumo6g02456 360 SMART iq_5 111 132 IPR000048 GO:0005515
Pumo6g02456 360 SMART iq_5 88 110 IPR000048 GO:0005515
Pumo6g02456 360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 131 IPR027417 -
Pumo6g02456 360 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Pumo6g02456 360 Pfam Protein of unknown function (DUF4005) 253 332 IPR025064 -
Pumo6g02456 360 Pfam IQ calmodulin-binding motif 116 130 IPR000048 GO:0005515
Pumo6g02456 360 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Pumo6g02456 360 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Pumo6g02456 360 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02456 Pumo-Chr6 52355372 52357101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02456 22 335 IQD Protein Family AT3G16490 52.299 3.00e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02456 - - gmx:100797909 578.941