Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02427 ATGTCAACAAATCAAGTATCCCTCAACCAAGCCAAATTTGTTGTTCCAACCAATGACCTTGAGCAGCAACAAGCAACAACAACTCTAGAGATTGATGAAGCTGAGGACAGCTTTGACTACTCAAAAAGATCTCAATGGCTTCGTGCTGCTGTTTTGGGAGCCAATGATGGGTTGGTCTCAACAGCATCACTGATGATGGGTGTTGGAGCAGTGAAGCATGACATCAAGGCCATGATCCTATCTGGGTTTGCAGGGTTGGTGGCAGGGGCATGCAGCATGGCCATAGGTGAGTTTGTGTCTGTGTACTCACAACTTGACATAGAAATTGCTCAAATGAAGAGAGAGAAGCAAAGGGGGCAGAGTAGAGGGAGATCAGATCAAGAGGGTGTTACCAATGAAGAGAAAGAGGGTTTGCCAAACCCTTTGCAAGCAGCAGCAGCCTCAGCTTTGGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCCTCTTTTATAAGGGAATATAAGGTGAGACTTGGAGTTGTTGTGGCTGCTGTGACCTTTGCCTTGGTGGTGTTTGGTTGGTTAGGGGCTGTGTTGGGTAAGGCTCCAGTGTTTAGGTCTGCTTTGAGGGTCTTGCTTGGGGGTTGGATGGCCATGGCCATCACTTTTGGGCTAACCAAGTTGATTGGATCAAGAGGACTTTAA 690 0.4754 MSTNQVSLNQAKFVVPTNDLEQQQATTTLEIDEAEDSFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQMKREKQRGQSRGRSDQEGVTNEEKEGLPNPLQAAAASALAFSVGAMVPLLAASFIREYKVRLGVVVAAVTFALVVFGWLGAVLGKAPVFRSALRVLLGGWMAMAITFGLTKLIGSRGL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02427 229 MobiDBLite consensus disorder prediction 114 133 - -
Pumo6g02427 229 Coils Coil 102 122 - -
Pumo6g02427 229 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 224 IPR008217 GO:0005384|GO:0030026
Pumo6g02427 229 MobiDBLite consensus disorder prediction 114 137 - -
Pumo6g02427 229 Pfam VIT family 128 221 IPR008217 GO:0005384|GO:0030026
Pumo6g02427 229 Pfam VIT family 47 123 IPR008217 GO:0005384|GO:0030026
Pumo6g02427 229 CDD Nodulin-21 45 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02427 Pumo-Chr6 49732363 49733641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02427 1 229 Nodulin-like Gene Family AT3G43660 65.502 7.66e-101 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02427 K22736 - gmx:100807991 366.311