Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02417 ATGGATACCCAGAAGAAGGAAAAACACATAGAACATAGAATCTCGTCTTGTGAGCTTTGTGATGTTGCTCTAAAGTCTGAGTCTTTATGGGATGTACACCAAGTTTCCTGCAAGCATTGCAAGTTTGTGTCTGTGTCGTTAGAGGTTGCTCAAATGAAGAGAGAGAAGGAAATGGGGCATAGTAGGTCTTTAGAGATTGAAACTGAGGACAACTTTGACTATCTAAAAAGATATCATTGGCTTCGTACTGCTATTGTGGGAGCCAGAGAAGGGTTGATCACAATGGGATCATTGATCATGGCTGTTGGAGATGTCAAGCAAGCCATTTTTAAGGCCGTGACCCTATCCAGGCTTGTAGGGTTGGTGGTAGGGACTTGTAGCAAGGTCATAGAGGAGTTTGTGTCTATGTATTCATAG 417 0.4269 MDTQKKEKHIEHRISSCELCDVALKSESLWDVHQVSCKHCKFVSVSLEVAQMKREKEMGHSRSLEIETEDNFDYLKRYHWLRTAIVGAREGLITMGSLIMAVGDVKQAIFKAVTLSRLVGLVVGTCSKVIEEFVSMYS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02417 138 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 58 138 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02417 Pumo-Chr6 48941247 48942578 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02417 64 138 Nodulin-like Gene Family AT1G21140 52.000 1.89e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02417 - - rcu:8283151 88.5817