Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02416 ATGAAGAGAGAAAAGGAAAAGGGGCATAGTAGAGAGAAAGACGAGGGAGATACCAATGAAGAGAAAGTGAGTTTGCCAAACCATTTACAAGCAGCAGTAGCCTCTGCTTTAGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCTTTAGCGTCCTTTATAAGGGAATATAAGGTGGGACTTGGGGTGGTTGTGGCTGTTGTGAGCTTTGGTTTGGTGGTATTTGGTTGGTTGTGGGCAGTCTTGAGTAAGGCTCCAATGTGGAGGTCTGCTGTGGTGGTCTTGGTTGGGTCTTGGATGATCATGGCCATTACTTTTGGGCTAACCATGTTGTTGGTCAAGTGA 348 0.4655 MKREKEKGHSREKDEGDTNEEKVSLPNHLQAAVASALAFSVGAMVPLLAALASFIREYKVGLGVVVAVVSFGLVVFGWLWAVLSKAPMWRSAVVVLVGSWMIMAITFGLTMLLVK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02416 115 Pfam VIT family 16 110 IPR008217 GO:0005384|GO:0030026
Pumo6g02416 115 MobiDBLite consensus disorder prediction 1 22 - -
Pumo6g02416 115 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 13 113 IPR008217 GO:0005384|GO:0030026
Pumo6g02416 115 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02416 Pumo-Chr6 48940880 48941227 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02416 2 113 Nodulin-like Gene Family AT3G43660 53.571 6.79e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02416 K22736 - gmx:100807991 140.969